Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0665 ATGAAAACACAACACAGAAGTTCTAAATCTATGCATCAACAGGGTTTTGATTCTCTGGTTTTCGACCACACTAACAACAAACCCGATTCCAAACTCTTCCATCTACAATCTTCTCCGTTAACATTCCCCACTTCCTCCACCACCGCCGTCGTACCACCAACCCTCAACTCCAAACCCGGTCACCGGAGATCGGTCTCCGCCGGAGCCCCATTAATATACTCCGGCGGAACTTCCACAATATCAACTCCCACTCCTACCGGAAAAACCCTCAAACCGGGTTTACCCTCTCGTGGGTCGACCCGAACCGACGTGTTGGGCTCAGGGACGGTGAACTACGGCCGCGGCAGCATAATGCGCGGTGGTTCAAAGTTAAGCATTAATAGTAACAGTAATATTAACAGTGGTGATGATAATCCAATGGGTGCGGGTGTATCGATGGTGAAGCACCGTGCAATGATTGGTTGTTCTGATCCTGAAGAGGTGAAGAGAATTGGGAATGAATTATATAAGAATGGGAGTTTTGCAGAGGCGTTGGTATTGTATGATCGTGCTGTTTCAATGTCGCCGGAGAATGCCGCTTATCGGAGTAACCGGGCGGCGGCACTTACGGCTTTAGGTAGGTTCGGAGAGGCGGTTAGGGAGTGTTATGAGGCTGTTAAGTTGGATCATTCTTATGCCAGGGCTCATATGAGGCTTGTTTCTCTTTATATTCGCTTTGGGCAGGTTGAGAACTCTCGGCGACATCTCTTTCTCTCCGGGCTGCAGGAGGATCAATCTGAAGAGCAGAAGCTGAGGTTATTGGAGAAACATCTGAACCAATGTGCAGATGCGCGAAAGGTCGGTGATTGGAAGACAGCGCTTAGGGAATCAGAGGCAGCCATTGCAGTGGGAGCAGATTTCTCACCTCAGCTTGTTACTTGTAAAGCCGAAGCTTATTTAAAACTCCATCGGCTTGAGGATGCCGAATCATGTCTCTCAAACATTCCCAAGTTGGAAGGTTGTCCTCCAGCCTGCACTCAAACCAAGTTTTTTGGTATGATCGGTGAAGCCTATGTGCCTTTTGTTGTCGCGCAGATTGAGATGGCATTGGGAAGGTTTGAGAATGCTGTCACAGCAGCAAAAAAGGCTAGCATGTTAGATTACAGTAATATTGAAGTTGCTAAGATTGTAAATACCGTGAGAATGGTGGCAAGAGCGCGTTCCAGGGGCAATGATCTTTTCAGTTCCGGCAAATTTTCTGAAGCTTGTTCTGCTTATGGAGAAGGCCTCAAATATGACATAGTCAACTATGTTCTATTTTGCAATAGAGCTATTTGTTGGTCTAAACTTGGACTATGGGAACAATCTGTTCAAGATTGCAACCAAGCTCTCAATATTCAACCAAATTACGCCAAGGCTCTATTTCGCAGGGCTGTGTCAAATACGAAGCTTGAACGATGGGCAGAAGTTGTTAAAGATTACGAGGCTTTGAAACGCGAACTCCCTGATGACATTGAAGTTGCTGAATCCCTTCGTCAGGCTCGACTTGCATTGGGAAAATGTCGTGGAGTGGCATATGGTACCAAGTTCGGAGTTGAAGTTGAAGAAATCTCTGTACTAGATAAATTTAAAGCTGCTATTGGCTCTGCTGGTGTTTGTGTAATTTATTTCAAAGAGGCATGGAACAAAGTATGTGAAGAAATATCTCCATTCATAAATACATTATGTGTTAGATATCCTTCTGTTAAATTTATCAAGGTGGACGTGGAAGAATGTCTAGCAATAGCAAAAGCTGAAAGGATAAGAAGTGTTCCAACTTTTAAAATTTATAAAAATGGTGAGAAGGTAGAAGAGATGATTTGTCCTACCCTTCAATTCTTAGAGGACTCACTGAGGAAAAGTATTAGCTTCTAG 1893 0.4459 MKTQHRSSKSMHQQGFDSLVFDHTNNKPDSKLFHLQSSPLTFPTSSTTAVVPPTLNSKPGHRRSVSAGAPLIYSGGTSTISTPTPTGKTLKPGLPSRGSTRTDVLGSGTVNYGRGSIMRGGSKLSINSNSNINSGDDNPMGAGVSMVKHRAMIGCSDPEEVKRIGNELYKNGSFAEALVLYDRAVSMSPENAAYRSNRAAALTALGRFGEAVRECYEAVKLDHSYARAHMRLVSLYIRFGQVENSRRHLFLSGLQEDQSEEQKLRLLEKHLNQCADARKVGDWKTALRESEAAIAVGADFSPQLVTCKAEAYLKLHRLEDAESCLSNIPKLEGCPPACTQTKFFGMIGEAYVPFVVAQIEMALGRFENAVTAAKKASMLDYSNIEVAKIVNTVRMVARARSRGNDLFSSGKFSEACSAYGEGLKYDIVNYVLFCNRAICWSKLGLWEQSVQDCNQALNIQPNYAKALFRRAVSNTKLERWAEVVKDYEALKRELPDDIEVAESLRQARLALGKCRGVAYGTKFGVEVEEISVLDKFKAAIGSAGVCVIYFKEAWNKVCEEISPFINTLCVRYPSVKFIKVDVEECLAIAKAERIRSVPTFKIYKNGEKVEEMICPTLQFLEDSLRKSISF 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0665 630 SUPERFAMILY TPR-like 159 258 IPR011990 GO:0005515
Lal10g0665 630 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 20 626 IPR044534 -
Lal10g0665 630 Pfam TPR repeat 165 206 - -
Lal10g0665 630 Gene3D Glutaredoxin 518 629 - -
Lal10g0665 630 CDD TRX_family 536 615 - -
Lal10g0665 630 SUPERFAMILY Thioredoxin-like 439 626 IPR036249 -
Lal10g0665 630 MobiDBLite consensus disorder prediction 71 109 - -
Lal10g0665 630 Pfam Thioredoxin 534 613 IPR013766 -
Lal10g0665 630 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL4 20 626 - -
Lal10g0665 630 MobiDBLite consensus disorder prediction 43 111 - -
Lal10g0665 630 SMART tpr_5 350 383 IPR019734 GO:0005515
Lal10g0665 630 SMART tpr_5 192 225 IPR019734 GO:0005515
Lal10g0665 630 SMART tpr_5 430 463 IPR019734 GO:0005515
Lal10g0665 630 SMART tpr_5 396 429 IPR019734 GO:0005515
Lal10g0665 630 SMART tpr_5 464 497 IPR019734 GO:0005515
Lal10g0665 630 SMART tpr_5 158 191 IPR019734 GO:0005515
Lal10g0665 630 SUPERFAMILY TPR-like 279 488 IPR011990 GO:0005515
Lal10g0665 630 Gene3D Tetratricopeptide repeat domain 156 515 IPR011990 GO:0005515
Lal10g0665 630 ProSiteProfiles TPR repeat profile. 158 191 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0665 Lal-Chr10 14463973 14467528 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0665 10 14463973 14467528 Lal10g0665 10 14463973 14467528 ECH
Lal10g0665 10 14463973 14467528 Lal8g0739 8 5275874 5279357 LSH
Lal1g0598 1 3831347 3835015 Lal10g0665 10 14463973 14467528 PCT
Lal9g0546 9 3691734 3695475 Lal10g0665 10 14463973 14467528 PCT