Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0663 ATGACTACACGCAACATTGAGAAGATGGCTTCAATTGATGCTCAGTTGAGGCTGCTAGCACCAAAGAAGGTGTCTGATGATGATAAATTGGTTGAATATGATGCTTTGTTATTGGATCGCTTCCTTGACATTCTTCAAGATTTGCATGGTGAAGACGTTAGGCAAACGGTTCAAGATTGTTATGAGCTGTCAGCTGAGTATGAAGGGAAGCATAAGCCAGAGAAGTTGGAGGAACTTGGGAATATGCTGACTGGTCTTGATGCTGGAGATTCTATTGTTATTGCCAAATCATTTTCTCACATGCTTAGTTTGGCCAACTTGGCAGAAGAAGTTCAAATTGCCTATCGGAGAAGGATCAAGTTATTAAAGAAGGGTGATTTTGCTGATGAGAACTCTGCCATAACTGAGTCGGACATCGAAGAGACACTCAAGAGGCTTGTGACTGAACTAAATAAGTCCCCCGAGGAAGTCTTTGATGCGTTGAAGAATCAAACTGTAGATTTGGTCCTAACTGCTCATCCTACTCAGTCTGTTCGTCGATCTTTGCTGCAAAAGCATGGAAGAAGGGTTATGGTAGCCCATTTGTTTTATATTCATCGTCTAGCTGCAATGGAATCTGGAAACCAATTACCTGTAATGCCAGGACAAGCATTAGGCATTTTGATGATTTCTGCACTAAGGATAAGGAATTGTTTAACACAGTTGTATGTTAAAGACATAACACCAGACGATAGGCACGAACTTGACGAGGCATTACAACGAGAGGTTCAAGCTGCATTTCGCACAGATGAGATTAGAAGGACTCCTCCTACACCACAAGATGAGATGAGGGCAGGAATGAGCTACTTTCATGAGACGATTTGGAAAGGTGTACCGAAGTTTTTGCGCCGGGTTGACACGGCTCTCAAGAACATTGGAATAAATGAGCGTGTCCCATACAATGCCCCTCTTATTCAATTTTCTTCTTGGATGGGTGGAGATCGTGATGGTAACCCCAGGGTAACCCCGGAAGTAACAAGGGATGTGTGTTTGCTGGCTAGAATGATGGCTGCTAATTTGTACTTCTCTCAGATAGAAGATCTCATGTTTGAGGGTATTGTTCTCACCTTCTTGCTTCTGTCTGCTTTGAAGTTATCTATGTGGCGTTGCAATGATGAACTCCGTGTTCGTGCTGATGAACTCCATAAGTCTTCAAAGAGATATGCAAAGCATTATATTGAGTTTTGGAAACAGATTCCTTCAAATGAGCCATATCGTGTTATTCTTGGTGATGTAAGGGACAAACTGTATAGTACACGCGAACGTTCTCGCCAGCTTTTAGCCAATGGGACCTCTGACATCCCTGAAGAGAAAACCTTCACAGATGTTGAGCAGTTCTTGGAGCCTCTTGAACTCTGCTATCAGTCACTCTGTGCAAGTGGTGATCGATCAATAGCAGATGGAAGCCTTCTTGATTTCTTGCGGCAAGTATCTACATTTGGACTTTCTATGGTAAAACTTGACATCCGTCAAGAGTCGGATAGGCACACTGACGTTATGGATGCAATTACGAAACACTTGGATATTGGATCTTACCGAGAATGGTCTGAGGAACGCAGACAGGAATGGCTCTTGTCTGAGCTTAGTGGAAAGCGCCCTCTCTTTGGCCCTGATCTTCCTAAAACAGAAGAAATTACCGATGTTTTGGAAACCTTCAATGTCATTGCAGAACTTCCCTCTGACAACTTTGGTGCCTATATCATCTCAATGGCAACATCCCCGTCTGATGTGCTTGCTGTTGAGCTTTTACAACGTGAATGTCATGTTAAGCAGCCATTGAGGGTTGTCCCATTGTTTGAAAAACTTGCTGATCTTGAGGCTGCTCCTGCTGCAGTAGCCCGACTTTTCTCTATAGAGTGGTACAGAAACCGTATCAATGGTAAGCAAGAAGTTATGATAGGATACTCGGACTCAGGAAAAGATGCAGGTCGTCTTTCTGCAGCTTGGGCACTCTACAAGGCTCAAGAAGAGCTGGTAAAGGTTGCAAAGGAGTTTGGTATAAAGCTGACAATGTTCCACGGTAGAGGAGGGACTGTTGGAAGAGGGGGAGGTCCTACTCATCTCGCTATATTATCTCAGCCACCAGATACTGTTCATGGCTCACTCCGGGTAACAGTTCAAGGTGAAGTTATTGAACAGTCATTTGGAGAGGAGCACTTATGCTTTAGGACACTTCAGCGTTTCACTGCTGCTACACTTGAGCATGGAATGCATCCACCTGTGTCACCAAAACCAGAATGGCGTGTTCTCTTGGATGAGATGGCTGTCATTGCAACAGAGGAGTACCGCTCCATTGTTTTCCAGGAACCCCGTTTTGTTGAATACTTTCGATGTGCAACTCCCGAGTTGGAATATGGGCGAATGAACATTGGAAGTCGTCCATCAAAACGAAAGCCGAGTGGAGGAATTGAATCACTGCGTGCTATTCCTTGGATTTTTGCTTGGACACAAACAAGGTTTCACTTACCAGTATGGCTTGGTTTTGGGACAGCATTTAAGCATGCAATTGAGAAGGATCCAAAGAATCTCAAAATCCTTCAAGACATGTACAATCAATGGCCTTTCTTCAGGGTTAGCCTTGACTTGGTCGAGATGGTGTTCGCCAAGGGAGACCCGGGTATTGCTGCCCTATATGACAAACTCCTAGTGTCAGAAGAGTTGTTGCCATTTGGTGAGCATTTAAGGGCTACCTATGAAGAAACCAAGAGCAATCTCCTCAAGGTTGCTGGGCACAGGGATGTTCTTGAAGGTGACCCCTACTTAAGGCAAAGACTTCGTCTTCGCGACTCGTACATCACAACCCTGAATGTCTTGCAAGCCTACACGTTGAAGCGAATCCGAGATCCGGACTACCATGTGAAGTTGAGGCCACACTTGTCAAAGGACTACATGGAATCAAACAAACCAGCTGCAGAGCTTGTGAAACTCAACCCTACAAGTGAGTATGCCCCTGGTTTGGAGGATACCCTTATTTTGACAATGAAGGGTATAGCTGCTGGCATGCAAAACACTGGTTAA 3057 0.4446 MTTRNIEKMASIDAQLRLLAPKKVSDDDKLVEYDALLLDRFLDILQDLHGEDVRQTVQDCYELSAEYEGKHKPEKLEELGNMLTGLDAGDSIVIAKSFSHMLSLANLAEEVQIAYRRRIKLLKKGDFADENSAITESDIEETLKRLVTELNKSPEEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRRVMVAHLFYIHRLAAMESGNQLPVMPGQALGILMISALRIRNCLTQLYVKDITPDDRHELDEALQREVQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFEGIVLTFLLLSALKLSMWRCNDELRVRADELHKSSKRYAKHYIEFWKQIPSNEPYRVILGDVRDKLYSTRERSRQLLANGTSDIPEEKTFTDVEQFLEPLELCYQSLCASGDRSIADGSLLDFLRQVSTFGLSMVKLDIRQESDRHTDVMDAITKHLDIGSYREWSEERRQEWLLSELSGKRPLFGPDLPKTEEITDVLETFNVIAELPSDNFGAYIISMATSPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAAVARLFSIEWYRNRINGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELVKVAKEFGIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTVHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRVLLDEMAVIATEEYRSIVFQEPRFVEYFRCATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGTAFKHAIEKDPKNLKILQDMYNQWPFFRVSLDLVEMVFAKGDPGIAALYDKLLVSEELLPFGEHLRATYEETKSNLLKVAGHRDVLEGDPYLRQRLRLRDSYITTLNVLQAYTLKRIRDPDYHVKLRPHLSKDYMESNKPAAELVKLNPTSEYAPGLEDTLILTMKGIAAGMQNTG 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0663 1018 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 1018 - -
Lal10g0663 1018 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 1018 IPR022805 GO:0006099|GO:0008964|GO:0015977
Lal10g0663 1018 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 644 656 IPR033129 -
Lal10g0663 1018 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 169 180 IPR018129 -
Lal10g0663 1018 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 226 1018 IPR015813 GO:0003824
Lal10g0663 1018 Gene3D Phosphoenolpyruvate/pyruvate domain 348 496 - -
Lal10g0663 1018 PRINTS Phosphoenolpyruvate carboxylase signature 255 268 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal10g0663 1018 PRINTS Phosphoenolpyruvate carboxylase signature 493 513 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal10g0663 1018 PRINTS Phosphoenolpyruvate carboxylase signature 642 662 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal10g0663 1018 PRINTS Phosphoenolpyruvate carboxylase signature 684 713 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal10g0663 1018 PRINTS Phosphoenolpyruvate carboxylase signature 816 842 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal10g0663 1018 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 188 IPR015813 GO:0003824
Lal10g0663 1018 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 1018 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal10g0663 1018 Pfam Phosphoenolpyruvate carboxylase 36 188 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lal10g0663 1018 Pfam Phosphoenolpyruvate carboxylase 226 1018 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0663 Lal-Chr10 14448718 14455760 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0663 10 14448718 14455760 Lal10g0663 10 14448718 14455760 ECH
Lal10g0663 10 14448718 14455760 Lal8g0735 8 5250494 5256447 LSH
Lal10g0663 10 14448718 14455760 Lal2g0513 2 3065401 3072184 PCT
Lal1g0602 1 3846060 3851976 Lal10g0663 10 14448718 14455760 PCT
Lal2g0632 2 3757259 3763295 Lal10g0663 10 14448718 14455760 PCT
Lal9g0549 9 3715922 3721726 Lal10g0663 10 14448718 14455760 PCT