Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1442 ATGTCATCACAAACAGCCGCCTCCATGGAGGCGCCGGAGTCCCACGCGCCGCTGCTCCGCCCCCTCACCGATGCCAGCCGAGCCCCCGTCCCCACGCTCGCGCTCCTCCTCGGTCGCGCCGGCCGTCGCGGTCCCTCCATGCTGGTGCGGGAGACGGCAGCGCGTGAGCTTGAGGAGCGCCGGGCCGACTGGGGTTACTCCAAGCCGGTGGTGGCGCTTGACATGTCGTGGAACATGGCCTTCGTCGTCGTCACGGCGGTGATGCTCGCATGCACTACCGCCGAGCGCCCGAACACGCCGATCCGCGTGTGGATCGTTGGCTACGCGCTGCAGTGCCTCGTGCACGTGTTGCTCGTGTGGCTCGAATACCGTCGCCGGAGCCGGAGGGACTCGCACCACGGCCAGAGAGCGCGGGACGTGGAGAGCGACGCCGGCAGCGGTGACGAAGACTACAGTGACGACAGAGATTGGAGCTCTGGCTACTCGTCTCGCTCCCGCTTCACAAAACGATGTGAGTTGTTAAATACTGGGGTTTCATTCCTTTGGTGGATAGTGGGCTTTTATTGGGTTGTCTCTGGTGGCAATATACTTCTGCAAGATGCCCCACGATTGTACTGGTTGGTTGTTGTCTTTCTGGCATTTGATGTCTTTTTTGCCATCTTCTGTGTTGTCTTGGCTTGCTTGATTGGCATTGCTCTCTGTTGTTGTTTGCCCTGCATCATTGCTATTCTCTATGCTGTTGCAGGACAGGAAGGTGCATCAGAAGCAGATCTTAGCATGCTTCCAAAATACAGATTTAGAATATTAAGCGATGAGGATAAGCCTAGTGGTGGAGCTGGATCTATGGTTCCCATAGAAACCAGCAGCGCTTACTTGGCAAATGAACGAACACTTCTACCTGAGGATGCGGAATGTTGTATATGCCTTTGTTCATATGAGGATGGAGCAGAGCTGCATGCTCTTCCCTGCAATCATCATTTCCATTCTTCATGCATTGTGAAATGGCTGAAGATGAATGCAACTTGTCCTCTCTGCAAGTACAATATTCTAAAGGGAAACGAACAAGTGTGA 1071 0.549 MSSQTAASMEAPESHAPLLRPLTDASRAPVPTLALLLGRAGRRGPSMLVRETAARELEERRADWGYSKPVVALDMSWNMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRDSHHGQRARDVESDAGSGDEDYSDDRDWSSGYSSRSRFTKRCELLNTGVSFLWWIVGFYWVVSGGNILLQDAPRLYWLVVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYRFRILSDEDKPSGGAGSMVPIETSSAYLANERTLLPEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1442 356 MobiDBLite consensus disorder prediction 134 162 - -
Gso7g1442 356 Pfam Ring finger domain 304 346 IPR001841 -
Gso7g1442 356 MobiDBLite consensus disorder prediction 134 160 - -
Gso7g1442 356 MobiDBLite consensus disorder prediction 1 21 - -
Gso7g1442 356 ProSiteProfiles Zinc finger RING-type profile. 305 346 IPR001841 -
Gso7g1442 356 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 10 356 - -
Gso7g1442 356 SUPERFAMILY RING/U-box 293 350 - -
Gso7g1442 356 SMART ring_2 305 345 IPR001841 -
Gso7g1442 356 CDD RING-H2_PA-TM-RING 304 346 - -
Gso7g1442 356 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 351 IPR013083 -
Gso7g1442 356 PANTHER TARGET OF ERK KINASE MPK-1 10 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1442 Gso-Chr7 31294228 31308401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1442 7 355 C3H Transcription Factor Family AT1G68070 66.289 2.27e-170 476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1442 7 31294228 31308401 Gso2g0698 2 7331219 7336371 GST