Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1987 ATGGACGATTCCTCTCAACTCCTCCAAGCAGCTTCTGATTTTGTTCACTACCCAGGGCCTCACAGCGATGATTCCTCCAGGGACTTTCTCAATCGTTTCCCTCTCCCAGTCATCATCAATGCATTACAGACTCAGTTAGATGTGCCTGGCCTAGAAAATACTCTTGTTGCATGCCTTGAAAGGTTATTCAATACGAAGTTGGGTGCTTCTCTGATCCCACAGTATATGCCTTTTGTTCAAGTTGGTCTGCAGGCAGATTCTCAAGCAGTCAGATCCTTAGCTTGCAAAACAGTTACATCCCTTCTGGAGAATCTAGACAATGATCACAAAGTTGCTGCTAGTGCTTGTCTAATTAAAGACTTCAACATATATCCTCTTTTGCTTGATTGTCTTATAAATGGCAATGAACAAGTGGCAGCTGTGGCAACAGATGCAATAAAAAAGTTAGCTGGTTTTCCTGAAGGCATGGAAATTATCTTTCCATCTGACAAAGGAGATGATACAGACCTGGAGATTATAGCATCACAATGTTCATCACTGGGCCGAGTTCGGGTACTGGCATTAGTGGTGAAGCTTTTCTCAGTATCTAGGTCAGCAGCGTCTACCATTTATAGTTTAAATCTACTTCAATTGTTGGAAGCAGAAATCAGAAATGCAGATGATACCCTTGTAACTTTAAGTGTTTTGGAGCTTATATATGAGTTAGCAGAGATTGAACATGGTACAGAATTTTTGTCAAAGACTAGCATCTTTCAATTGCTTTCGTCAATGATCAGCCACAATTCTATGGAATCAATTTTAAGATCAAGAGCAATGATGATAAGTGGAAGGCTACTGTCCAAGGATATTATATACTCCTTCACGGATGAACCTTGTGTTAAAGCTGTTATTTCGTCTATTGATGGTAGACTTCAGTCATTGGAAGCTTCAGATAGAGATGAATGTGAAACTGCACTTGAATCATTGGGTCATATGGGATCATCTATCCAGGGAGCTACATTACTACTCTCAGGTTCATCACCTGCTGCTCGACATGTTATAAATGCTGCTTTTGAACGACAAGGACCAACAGGGCATGGTAAACAGCTGGCAGCATTGCATGCTCTAGGAAACATCTCGGGAGAAACCAGATCTGAGAACAACATCATACTCAATGCCGAAGAAGAAGAAAACCTGCGACGCTTAATTTATGAAACAGCATCCAGAAGCTCAAAGCTGACTCCATCGGGTCTTTTTCTGTCAGTATTGCAGCAGGATTCAGAAATACGTCTAGCGGGCTATAGAATGCTAAGTGGATTGGTTGCCCGACCATGGTGCTTGATGGAGATATGTTCAAAACAAGAGATTATAAATAAAGTTACGGACCCAAGTACTGAAACGACAAAAATAGGTATGGAAGGCAGATATAACTGCTGCAAGGCAATACACAAATCATTGACAGTGTCTAGTAGAGTTTCTGCTAATCCTGCTTTTGCAGGAATAGCTGCAAAGTTTCAGGAAGCTGTTGGAATGGGTCCATATCTTGTTAAAAGGCATGTTGAAGCTCAACCTGCTGTGATAACGGCTGATAGATTTTAG 1578 0.4125 MDDSSQLLQAASDFVHYPGPHSDDSSRDFLNRFPLPVIINALQTQLDVPGLENTLVACLERLFNTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTSLLENLDNDHKVAASACLIKDFNIYPLLLDCLINGNEQVAAVATDAIKKLAGFPEGMEIIFPSDKGDDTDLEIIASQCSSLGRVRVLALVVKLFSVSRSAASTIYSLNLLQLLEAEIRNADDTLVTLSVLELIYELAEIEHGTEFLSKTSIFQLLSSMISHNSMESILRSRAMMISGRLLSKDIIYSFTDEPCVKAVISSIDGRLQSLEASDRDECETALESLGHMGSSIQGATLLLSGSSPAARHVINAAFERQGPTGHGKQLAALHALGNISGETRSENNIILNAEEEENLRRLIYETASRSSKLTPSGLFLSVLQQDSEIRLAGYRMLSGLVARPWCLMEICSKQEIINKVTDPSTETTKIGMEGRYNCCKAIHKSLTVSSRVSANPAFAGIAAKFQEAVGMGPYLVKRHVEAQPAVITADRF* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1987 525 Pfam Proteasome non-ATPase 26S subunit 67 516 IPR019538 GO:0043248
Gso6g1987 525 Gene3D - 25 480 IPR011989 -
Gso6g1987 525 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED 3 525 IPR019538 GO:0043248
Gso6g1987 525 SUPERFAMILY ARM repeat 83 477 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1987 Gso-Chr6 34953037 34966904 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1987 6 34953037 34966904 Gso6g1987 6 34953037 34966904 ECH
Gso12g1337 12 32048664 32070422 Gso6g1987 6 34953037 34966904 GST