Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0700 ATGGCGATTGAAACGCTCGTGCTGGGCGCTGGTCAAGAAGTTGGCAAGAGCTGCGTGGTGGTAACCATCAACGCCAAGCGAATCATGTTCGATTGCGGAATGCACATGGGCTACTTGGATCATCGTCGTTACCCTGATTTCACCCGCATCTCCCCCAGTAGAGATCTCAACTCTGCCCTCTCTTGCATCATCATCACTCACTTTCACTTGGATCACGTTGGTGCTTTAGCTTACTTCACTGAAGTTTTGGGGTATAACGGACCGGTTTACATGACGTACCCGACAAAAGCTTTGGCTCCTTTAATGTTGGAAGACTATCGGAAAGTGATGGTTGATCGCCGGGGGGAGGAAGAGCTATTCTCTTCTGATCAAATTGCTGAGTGCATGAAGAAAGTTATTGCTGTTGATCTGAGGCAGACTGTACAAGTAGAGAAAGACCTGCAGATACGTGCCTATTATGCAGGACATGTTATTGGAGCTGCAATGTTCTATGCAAAAGTGGGAGACGCAGAAATGGTTTATACAGGAGACTATAATATGACACCAGATAGACACCTTGGAGCAGCTCAAATTGATCGACTACGACTTGACCTTCTTATAACTGAATCCACATATGCGACTACAATACGTGATTCAAGATATGCTCGAGAGAGGGAATTCCTTAAAGCTGTTCATAAATGTGTATCTTGTGGAGGAAAGGTGCTTATTCCAACATTTGCACTTGGAAGAGCTCAGGAACTATGCATTTTGTTGGAAGACTACTGGGAACGCATGAATTTGAAGGTTCCTATCTACTTCTCAGCAGGTTTAACAATCCAAGCTAATGCATATTACAAGATGCTTATTCGTTGGACAAGGCAGAAGATTAAAGATACATACTCTAAACATAATGCTTTTGATTTTAAGAATGTTCAAAAATTTGAAAGGTCTATGATAGATGCTCCTGGCCCTTGTGTTCTTTTCGCCACTCCTGGGATGTTAAGCGGTGGATTTTCAGTTGAAGTTTTTAAGCACTGGGCAGTGTCAGAAAATAACCTTGTCAGTTTGCCTGGGTATTGTGTGCCTGGAACAATAGGTCATAAATTAATGTCAGATAAGCATGACAAAGTTGACCTGGATCCTAATACAAAAATAGATATTCATCAGTTGGCTTTTAGTCCTCACACGGATTCTAAAGGGATAATGGATCTTGTAAATTTTCTCTCCCCGAAGCATGTTATACTAGTGCATGGCGAGAAGCATAAGATGGCTTCCCTTAAAGAAAAAATTCATTCTGAATTGGGGATTCAATGTTATGATCCTGCAAATAATGAAACTGTAACCATTCCTTCAGCTAACTATGTATATGCAGAGACCTCAGACACTTTCATTCGAAGCTGCTTGAGTCCGAACTTCACATTTCAGAAGTGCAGTTCGGTGGACTTATGTAACTCAACTACGGTAGACAGAAACTTAATGCCTGAGCTTCAAGTTGAAGATGAAAGGGTAGCAGAAGGAGTTTTGGTCTTGGAGAAAGGAAAAAAGGCAAAGATTGTACACCAGGATGAACTTTTGCTTATGTTGGAGGAACAGAAGCACGATGCTTAG 1587 0.4197 MAIETLVLGAGQEVGKSCVVVTINAKRIMFDCGMHMGYLDHRRYPDFTRISPSRDLNSALSCIIITHFHLDHVGALAYFTEVLGYNGPVYMTYPTKALAPLMLEDYRKVMVDRRGEEELFSSDQIAECMKKVIAVDLRQTVQVEKDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSRYAREREFLKAVHKCVSCGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIYFSAGLTIQANAYYKMLIRWTRQKIKDTYSKHNAFDFKNVQKFERSMIDAPGPCVLFATPGMLSGGFSVEVFKHWAVSENNLVSLPGYCVPGTIGHKLMSDKHDKVDLDPNTKIDIHQLAFSPHTDSKGIMDLVNFLSPKHVILVHGEKHKMASLKEKIHSELGIQCYDPANNETVTIPSANYVYAETSDTFIRSCLSPNFTFQKCSSVDLCNSTTVDRNLMPELQVEDERVAEGVLVLEKGKKAKIVHQDELLLMLEEQKHDA* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0700 528 Gene3D - 212 389 - -
Gso2g0700 528 SMART Lactamase_B_5a 15 232 IPR001279 -
Gso2g0700 528 PANTHER INTEGRATOR COMPLEX SUBUNIT 11 1 527 - -
Gso2g0700 528 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER 1 527 - -
Gso2g0700 528 SUPERFAMILY Metallo-hydrolase/oxidoreductase 6 443 IPR036866 -
Gso2g0700 528 SMART Beta_Casp_2 244 362 IPR022712 -
Gso2g0700 528 Gene3D - 8 423 IPR036866 -
Gso2g0700 528 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 377 432 IPR011108 -
Gso2g0700 528 Pfam Beta-Casp domain 244 362 IPR022712 -
Gso2g0700 528 CDD INTS11-like_MBL-fold 6 203 IPR041897 -
Gso2g0700 528 Pfam Metallo-beta-lactamase superfamily domain 22 191 IPR001279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0700 Gso-Chr2 7341030 7353382 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0700 2 7341030 7353382 Gso2g0700 2 7341030 7353382 ECH