Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0698 ATGTCATCACAAACCGCGCCCACGGAGGCGCCGGAGCCTTATACGCCGCTTCTCCGCTCCCGCACCGATGCCGGCCGAGGTCCCGCCCCCGCGCTGGCGCTCCTTCTCGGCCGCGCCGGCCGCCGTGGCCCATCCATGCTGGTACGTGAGACGGCGGCGCGTGAGCTCGAGGAGCGCCGCGCTGACTGGGGCTACTCCAAGCCGGTGGTGGCGCTCGACATGTCGTGGAACATGGCCTTCGTGGTCGTCTCGGCGGCTATGCTCGCATGCACCACCTCCGAGCACCCGACCACGCCGATCCGCGTGTGGATCGTTGGGTACGCGCTGCAGTGCCTCGTGCACGTGTTGCTCGTGTGGCTCGAGTACCGGCGCCGGAGCCGGAGGGACTCTCGCAGCGGCAGCCAGAGGGCGCGGGACGTGGAGAGCGACGCCGGCAGCGGCGACGATGACGACTACAGTGACGACGGAGATGGGAGCTCTGGCAGCACGTCTCGCTCCAGATTCGCAAAACAATGTGAGTCGTTAAATACCGGGGTTTCATTCATTTGGTGGATAGTGGGCTTTTATTGGGTTGTCTCTGGTGGCGATATACTTCTGCAAGATGCCCCAAGATTGTACTGGTTGGCTGTTGTCTTTCTGGCATTTGATGTCTTTTTTGCCATCTTTTGTGTTGTCTTGGCATGCTTGATTGGCATTGCTCTCTGTTGTTGTTTGCCCTGCATCATTGCTATTCTCTATGCTGTTGCAGGACAGGAAGGTGCGTCAGAAGCAGATCTTAGCATGCTTCCGAAATACAAATTTCGAATATTAAGTGATGTGGATAAACCTAGTGGTGGAGCTGGATCAATGGTTCCCATAGAAACCAGCAGTGCTTACTTGGAAAATGAACGAACACTTCTACTCGAGGATGCGGAATGTTGTATATGCCTCTGTTCATACGAGGATGGAGCAGAGCTGCATGCTCTTCCCTGCAACCATCATTTCCATTCTTCGTGCATTGTGAAATGGCTGAAGATGAATGCAACTTGTCCTCTCTGCAAGTACAATATTCTCAAGGGAAACGAACAAGTGTGA 1074 0.5587 MSSQTAPTEAPEPYTPLLRSRTDAGRGPAPALALLLGRAGRRGPSMLVRETAARELEERRADWGYSKPVVALDMSWNMAFVVVSAAMLACTTSEHPTTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRDSRSGSQRARDVESDAGSGDDDDYSDDGDGSSGSTSRSRFAKQCESLNTGVSFIWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYKFRILSDVDKPSGGAGSMVPIETSSAYLENERTLLLEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0698 357 ProSiteProfiles Zinc finger RING-type profile. 306 347 IPR001841 -
Gso2g0698 357 MobiDBLite consensus disorder prediction 1 26 - -
Gso2g0698 357 CDD RING-H2_PA-TM-RING 305 347 - -
Gso2g0698 357 PANTHER TARGET OF ERK KINASE MPK-1 9 357 - -
Gso2g0698 357 Pfam Ring finger domain 305 347 IPR001841 -
Gso2g0698 357 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 352 IPR013083 -
Gso2g0698 357 SUPERFAMILY RING/U-box 296 351 - -
Gso2g0698 357 MobiDBLite consensus disorder prediction 133 165 - -
Gso2g0698 357 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 357 - -
Gso2g0698 357 SMART ring_2 306 346 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0698 Gso-Chr2 7331219 7336371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0698 1 356 C3H Transcription Factor Family AT1G68070 66.947 8.85e-170 475
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0698 2 7331219 7336371 Gso2g0698 2 7331219 7336371 ECH
Gso7g1442 7 31294228 31308401 Gso2g0698 2 7331219 7336371 GST