Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0695 ATGGACTCAAACTCAAAGGCTGTGTGCTTCATAACCCACCAAGCCATTTTCAACGCGGTTCGATGTGGGGACCTTGAAGGGCTGAAGGAGCAGCTGAAGAACAAGGGTGAAGAGGGGGTTTCTGAGGTGATGTCTATGCAGAACGATGCAGGGGAAACCATGTTCTACATAGCTGCTGAGATTGGTCTTCGTGAGGTGTTCAGCTTCTTGTTTGGTTTATGTGACATGGAGGTGCTGAAGATCAGGGCCAAATCGGATTTGAACCCCTTTCACGTTGCAGCCAAAGGTGGCCATTTGGATATTGTAAGGGAAATTTTGAGTACTTGGCCTGAGGTTTGCACGTTATGCGACTCCTCTAACACTAGTCCCCTATATTTTGCTGCTATTGGAGATCATTTGGATGTAGTGAATGCAATATTGGATGTTGATGTGAGTTCAATGATGATAGTAAGGAAAAATGGCAAAACTGCATTGCACAATGCTGCTAGGTATGGCATCCTTCGCATTGTAAAAGCACTGATTGCCCGGGATCCCGGAATAGTCTGCATCAAAGATAGAAAGGGTCAAACTGCACTGCATATGGCTGTGAAAGGACAAAGTACTTCAGTGGTGGATGAGATATTACAAGCTGATCTTACCATATTGAATGAACGAGATAAGAAGGGTAACACAGCTCTTCACATGGCTACCAGGAAATGCCGTCCTCAGGTAGTAAGCATTTTGTTAACCTACACAGCTCTGAATGTCAATGCCATCAATAATCAGAAGGAAACAGCCTTGGATTTGGCAGATAAACTACGATATGGAGATTCAGCTTTGGAAATCAAGGAGGCCCTTGCAGAATGTGGTGCCAAGCATGCCAGGCATATCGGGAAAGTGAATGAAGCCATGGAACTAAAAAGAGCCGTGAGTGATATAAAGCATGAGGTGCAGTCACAGCTCATACAGAATGAAAAGACTCGCAAACGAGTTTCTGGTATTGCTAAGGAATTGAAGAAAATTCATAGAGAGGCAGTTCAAAACACCATCAATTCTGTCACAGTAGTAGCTGTCCTTTTTGGCTCAATAGCATTCATGGCCTTATTCAGTCTACCCGGTCAATATCGAAAGAAGCAACCAGAGGCAGGGAAGGCAAATATAGCCGATGATGCTGCCTTCAGTGCTTTCTGCCTTTTGAACGCTACAGCTCTTTTCCTTTCACTTGCAGTTGTTGTTGCTCAAATCACTTTGGTGGCTTGGGATACAAGGTCTCAAAGGCAGGTTGTGTCAGTGATTAACAAGCTAATGTGGGCTGCATGTGCCTGCACTTGTGGTGCTTTTCTTGCTATATCTTTTGTGGTTGTTGGAGATGAAACATGGCTGGCTATTAGTGTCACAGTTTTGGGGGCACCAATTCTACTTGGTACTCTAGCATACTTGTGCTACTTTGTTTTTAGGCGACGCTTTGGACTCCGCAGTGATTCCCAGGGATTAGTCAAGAGACCAAGTGGAAGCAAGTCATTCTCATGGTCCTACTCAGTTAATATATCAGATGTGGATGATTATGATTCTGATCATGTGAAGATATATGCTCTATAA 1578 0.4404 MDSNSKAVCFITHQAIFNAVRCGDLEGLKEQLKNKGEEGVSEVMSMQNDAGETMFYIAAEIGLREVFSFLFGLCDMEVLKIRAKSDLNPFHVAAKGGHLDIVREILSTWPEVCTLCDSSNTSPLYFAAIGDHLDVVNAILDVDVSSMMIVRKNGKTALHNAARYGILRIVKALIARDPGIVCIKDRKGQTALHMAVKGQSTSVVDEILQADLTILNERDKKGNTALHMATRKCRPQVVSILLTYTALNVNAINNQKETALDLADKLRYGDSALEIKEALAECGAKHARHIGKVNEAMELKRAVSDIKHEVQSQLIQNEKTRKRVSGIAKELKKIHREAVQNTINSVTVVAVLFGSIAFMALFSLPGQYRKKQPEAGKANIADDAAFSAFCLLNATALFLSLAVVVAQITLVAWDTRSQRQVVSVINKLMWAACACTCGAFLAISFVVVGDETWLAISVTVLGAPILLGTLAYLCYFVFRRRFGLRSDSQGLVKRPSGSKSFSWSYSVNISDVDDYDSDHVKIYAL* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0695 525 Gene3D - 12 212 IPR036770 -
Gso2g0695 525 SUPERFAMILY Ankyrin repeat 14 269 IPR036770 -
Gso2g0695 525 Pfam Ankyrin repeats (3 copies) 90 176 IPR002110 GO:0005515
Gso2g0695 525 Pfam Ankyrin repeats (3 copies) 185 250 IPR002110 GO:0005515
Gso2g0695 525 ProSiteProfiles Ankyrin repeat profile. 153 174 IPR002110 GO:0005515
Gso2g0695 525 Gene3D - 213 301 IPR036770 -
Gso2g0695 525 ProSiteProfiles Ankyrin repeat region circular profile. 153 174 - -
Gso2g0695 525 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 2 525 - -
Gso2g0695 525 SMART ANK_2a 85 114 IPR002110 GO:0005515
Gso2g0695 525 SMART ANK_2a 187 216 IPR002110 GO:0005515
Gso2g0695 525 SMART ANK_2a 50 78 IPR002110 GO:0005515
Gso2g0695 525 SMART ANK_2a 119 149 IPR002110 GO:0005515
Gso2g0695 525 SMART ANK_2a 153 182 IPR002110 GO:0005515
Gso2g0695 525 SMART ANK_2a 221 251 IPR002110 GO:0005515
Gso2g0695 525 Pfam Domain of unknown function 337 447 IPR026961 -
Gso2g0695 525 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 2 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0695 Gso-Chr2 7299760 7303909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0695 6 525 Miscellaneous Gene Families AT2G01680 64.783 0.0 694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0695 2 7299760 7303909 Gso2g0695 2 7299760 7303909 ECH
Gso7g1432 7 30526434 30530851 Gso2g0695 2 7299760 7303909 GST