Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0655 ATGGACGAAAGTTGGAGTGAGGGAAAAAGGAGCATGAGTTACAAGGAGGAGGATGAGTACGAAGAAGAGGAAGAGGAGGAGGTGAGTGAGTATAGAGATGATGGTAGGAAAAAGAAGGTGGTGAGTAGTAAGAGAGGGTCCAAAGCTGGAGGCTCAGTGCCACCTTCATGTCAAGTTGATGGTTGTAGCGCTGATCTAAGTGAAGCTAAGCCCTACCATAGGCGTCACAAGGTTTGTGAGTACCATGCCAAGGCTCCTGCCGTACTCATTGGAGACCAGCACCAACGGTTTTGCCAACAATGTAGTAGGTTTCATGAGCTATCAGAATTCGATGACTCAAAAAGGAGTTGCAGAAGACGTTTGGCTGGACATAATGAGAGGCGTCGCAAAAATGCATCTGAATACCACGAACTTTGA 417 0.47 MDESWSEGKRSMSYKEEDEYEEEEEEEVSEYRDDGRKKKVVSSKRGSKAGGSVPPSCQVDGCSADLSEAKPYHRRHKVCEYHAKAPAVLIGDQHQRFCQQCSRFHELSEFDDSKRSCRRRLAGHNERRRKNASEYHEL* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0655 138 PIRSF SBP 3 138 IPR017238 GO:0003677|GO:0003700|GO:0009908
Gso15g0655 138 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 3 13 132 - -
Gso15g0655 138 SUPERFAMILY SBT domain 55 135 IPR036893 GO:0003677|GO:0005634
Gso15g0655 138 Pfam SBP domain 57 130 IPR004333 GO:0003677
Gso15g0655 138 MobiDBLite consensus disorder prediction 1 16 - -
Gso15g0655 138 ProSiteProfiles Zinc finger SBP-type profile. 54 131 IPR004333 GO:0003677
Gso15g0655 138 MobiDBLite consensus disorder prediction 1 59 - -
Gso15g0655 138 Gene3D - 47 118 IPR036893 GO:0003677|GO:0005634
Gso15g0655 138 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 13 132 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0655 Gso-Chr15 5860963 5863048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0655 57 134 SBP-box Gene Family AT2G33810 73.077 2.00e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Gso15g0655 SBP 3.4e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0655 15 5860963 5863048 Gso15g0655 15 5860963 5863048 ECH
Gso15g0655 15 5860963 5863048 Gso11g2949 11 45272125 45274366 GST
Gso7g1687 7 38938001 38940118 Gso15g0655 15 5860963 5863048 PCT