Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2947 ATGGTGGGCTCAGGAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGATGCCCTCAGAAGAGTCTGTCTCAACTCAGACTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCGAGAGTCCGAGGTGGCAATGGCTGCAAGGTTGGAGACGATAGCGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCAAGGAAGGGGTTCAGGATGTCTGGAAGATATTGATGGAGAGGATCCTGTCAGAAAGGCCTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAACCAAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGACAGACCAGTTTGAGTCAGGCATTCAGACCATAGCTGTTATTCAAGCTGGACATGGTCTTCTCCAACTTGGTTCTTGCAAGATTATTCCTGAAGATCTCCGTTTTGTGCTTAGAATGAGACACACTTTTGAATCCCTTGGCTACCAATCTGGTTTCTACCTCTCTCAACTCTTCTCTTCAACAAGGAACACTTCCTCATCAACTTCTGTTCCCTCAAAACCATCCACCATTCCAATTAGGCCACCTCCTCCACTCTTCAACTGGGGTCAGAGGCCACTTTCTTCTGCCACTTCCATGCTATCCTCACCGAATTTTCAACAACATGAAGCCAGGCTTGGGTTTCCAAAAGATGAGGCGCACATGTTTCTCATGCCTCATGCATCATCTGAGGGTGCAAGAATCGAGGACATGATGGGGGAGCATGAAAACGACATAAAATGGCCCAATGGCTTGTCTTTCTTCAATGCTCTCACTGGAAGAACAGATGATGCTAAGCTCTTGTTCAATCCTGAGAGCTTGGGGAACAAACCTGGTGATCAGAATCAGCATCACACTATTGGCCAAAACCCCAATTCAGATGGATCCAACATGCAAAATGCTAGTGGTGGAACCAACCCAAATGAGTTCTTGAGCTTGGATAGCCACCAAGATGATGCAAGGAAAATGGACAAGTTTAAGAGGAGCTTCACTCTTCCTTCAAGAGTGGCCTCATCAACTTCATCCACTTCAATGGATCAACATCAACAACAACAACAACAACAAGGTGTGGAGTATACGAATTCAGAAGGAGGTATGTATCCGGATGTCATGGAAACCTTTTTGGAGTGA 1260 0.4627 MVGSGASDRSKEAVGMMALHDALRRVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDSGSLMLMWEDGFCQGRGSGCLEDIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLRFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSVPSKPSTIPIRPPPPLFNWGQRPLSSATSMLSSPNFQQHEARLGFPKDEAHMFLMPHASSEGARIEDMMGEHENDIKWPNGLSFFNALTGRTDDAKLLFNPESLGNKPGDQNQHHTIGQNPNSDGSNMQNASGGTNPNEFLSLDSHQDDARKMDKFKRSFTLPSRVASSTSSTSMDQHQQQQQQQGVEYTNSEGGMYPDVMETFLE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2947 419 MobiDBLite consensus disorder prediction 372 419 - -
Gso11g2947 419 MobiDBLite consensus disorder prediction 375 404 - -
Gso11g2947 419 MobiDBLite consensus disorder prediction 207 228 - -
Gso11g2947 419 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 73 IPR025610 -
Gso11g2947 419 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 87 187 IPR025610 -
Gso11g2947 419 PANTHER GB|AAF34833.1 1 419 IPR044170 -
Gso11g2947 419 MobiDBLite consensus disorder prediction 312 356 - -
Gso11g2947 419 MobiDBLite consensus disorder prediction 318 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2947 Gso-Chr11 45258109 45261039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2947 21 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.343 8.18e-21 93.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1912 12 42995880 42998924 Gso11g2947 11 45258109 45261039 GST
Gso11g2947 11 45258109 45261039 Gso12g1364 12 35306546 35310306 PCT
Gso12g1364 12 35306546 35310306 Gso11g2947 11 45258109 45261039 PCT