Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00385 ATGGCCAAAACAAAACTAACCTTATTAATAATCTCCTTCTTCACCACTTTTTCTGTTGTTTGTCTCTCCTCCCCCGCGGATTTTTTCCTCTATGGCGGGTGCACGCAGCAGCGTTACACCTCGAACTCGCCCTACGAGTCTAACCTGaactcgctcctgacctcgctggtgaactcggccacctactcttcctacaacaacctcaccgtggtggggtccagccagagcgacgccgtctacggcctctaccagtgccgcggcgacctcgccatgcctgactgcgccgcctgcgtctcccgtgccgtctcccgcgccgggcagctctgcccagcaacgtgcggcggcgcggtccagctggacggctgcttcatcaagtacgacaatgtcacattcctgggtgtggaggacaagacCGTCGTGCTGAAGCGGTGTGGGCCCTCGGTGGGATTCGGGCCGGTCGGGTCGGGTGAGAGGGATGCGGTGATGGGCGGGTTGGCCGGTTCGGGCGGGTATTTCCGGGTCGGCGGGTCGGGTGATGTGAAGGGTGTGGCGCAGTGTTGTGGGGATTTGAGTTTCGCCGAGTGTCAGGATTGTGTGGGGGATGCGATCCGACGGCTGAGGAGTGAGTGTGCTGCTGCGGATTATGGGGATGTGTTCTTGGGGAAGTGTTACGCTAGATTCTCCACCAATGGTGCACATGCTTACAATTACAACAAGGCCCATGCAGGAAAATCGGGCAATGAAGGTGAGAAGACATTTGCAATAATTGTTGGATTATTAGCAGGAGTAGCTATACTCATTATTTTCCTTGCTTTCCTGAGAAGGATTTGTGAGGGACACGGTAAATAA 849 0.3604 MAKTKLTLLIISFFTTFSVVCLSSPADFFLYGGCTQQRYTSNSPYESNLNSLLTSLVNSATYSSYNNLTVVGSSQSDAVYGLYQCRGDLAMPDCAACVSRAVSRAGQLCPATCGGAVQLDGCFIKYDNVTFLGVEDKTVVLKRCGPSVGFGPVGSGERDAVMGGLAGSGGYFRVGGSGDVKGVAQCCGDLSFAECQDCVGDAIRRLRSECAAADYGDVFLGKCYARFSTNGAHAYNYNKAHAGKSGNEGEKTFAIIVGLLAGVAILIIFLAFLRRICEGHGK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00385 282 ProSiteProfiles Gnk2-homologous domain profile. 27 131 IPR002902 -
Gma18g00385 282 ProSiteProfiles Gnk2-homologous domain profile. 132 232 IPR002902 -
Gma18g00385 282 Pfam Salt stress response/antifungal 34 128 IPR002902 -
Gma18g00385 282 Pfam Salt stress response/antifungal 175 229 IPR002902 -
Gma18g00385 282 Gene3D - 27 131 IPR038408 -
Gma18g00385 282 Gene3D - 160 231 IPR038408 -
Gma18g00385 282 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 278 - -
Gma18g00385 282 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 7 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00385 Gma-Chr18 3439614 3441632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00385 6 228 Pollen Coat Proteome AT4G20670 25.620 2.90e-16 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00385 18 3439614 3441632 Gma18g00385 18 3439614 3441632 ECH
Gma18g00385 18 3439614 3441632 Gma14g02081 14 51948173 51950480 PCT
Gma18g00385 18 3439614 3441632 Gma02g02309 02 49159473 49161214 PCT
Gma14g02081 14 51948173 51950480 Gma18g00385 18 3439614 3441632 PCT
Gma02g02309 02 49159473 49161214 Gma18g00385 18 3439614 3441632 PCT