Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00721 ATGGACGAAAGTTGGAGTGAGGGAAAAAGGAGCATGAGTTACAAGGAGGAGGATGAGTACGAAGAAGAGGAAGAGGAGGAGGTGAGTGAGTATAGAGATGATGGTAGGAAAAAGAAGGTGGTGAGTAGTAAGAGAGGGTCCAAAGCTGGAGGCTCAGTGCCACCTTCATGTCAAGTTGATGGTTGTAGCGCTGATCTAAGTGAAGCTAAGCCCTACCATAGGCGTCACAAGGTTTGTGAGTACCATGCCAAGGCTCCTGCCGTACTCATTGGAGACCAGCACCAACGGTTTTGCCAACAATGTAGTAGGTTTCATGAGCTATCAGAATTCGATGACTCAAAAAGGAGTTGCAGAAGACGTTTGGCTGGACATAATGAGAGGCGTCGCAAAAATGCATCTGAATACCACGAACTTTGA 417 0.47 MDESWSEGKRSMSYKEEDEYEEEEEEEVSEYRDDGRKKKVVSSKRGSKAGGSVPPSCQVDGCSADLSEAKPYHRRHKVCEYHAKAPAVLIGDQHQRFCQQCSRFHELSEFDDSKRSCRRRLAGHNERRRKNASEYHEL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00721 138 PIRSF SBP 3 138 IPR017238 GO:0003677|GO:0003700|GO:0009908
Gma15g00721 138 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 3 13 132 - -
Gma15g00721 138 SUPERFAMILY SBT domain 55 135 IPR036893 GO:0003677|GO:0005634
Gma15g00721 138 Pfam SBP domain 57 130 IPR004333 GO:0003677
Gma15g00721 138 MobiDBLite consensus disorder prediction 1 16 - -
Gma15g00721 138 ProSiteProfiles Zinc finger SBP-type profile. 54 131 IPR004333 GO:0003677
Gma15g00721 138 MobiDBLite consensus disorder prediction 1 59 - -
Gma15g00721 138 Gene3D - 47 118 IPR036893 GO:0003677|GO:0005634
Gma15g00721 138 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 13 132 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00721 Gma-Chr15 5942085 5943862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00721 57 134 SBP-box Gene Family AT2G33810 73.077 2.00e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Gma15g00721 SBP 3.3e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00721 15 5942085 5943862 Gma15g00721 15 5942085 5943862 ECH
Gma12g02122 12 42029662 42030771 Gma15g00721 15 5942085 5943862 ECH
Gma13g02437 13 39145229 39146366 Gma15g00721 15 5942085 5943862 ECH
Gma13g02616 13 40965576 40967155 Gma15g00721 15 5942085 5943862 ECH
Gma15g00721 15 5942085 5943862 Gma13g02106 13 36178951 36180838 GST
Gma07g01935 07 40611444 40613388 Gma15g00721 15 5942085 5943862 PCT