Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02577 ATGTCCAACACTCTGCAGCAACAGAGTCCCGAATCGAAACGACTCGATCTGGGTTCCAACGCTCGCCGGCCATGCCACCGGAGATCGGTCTCCGCCGGAGCTCCGTTAATTTATTCCGGCGGAGCAACCTTGCTCCCGAGCGGGAACATTTGCCCGTCGGGAAAGATCCTCAAACCCGGTTTACCCTCTCGCGGGCCGAACCGGACCGACGTGTTGGGCTCGGGCACCGTGAACTACGGCCGGGGCAGCATAGTGCGCGGTGGCTCGGGCAATATTCCGGTGCCCGCGGCCGCACCGCCGCTTACGGTGAAGCGCGCGATGAGCGGCTCCGATCCCGAGGAAGTGAAGAGGGCTGGGAATGAATTGTACAGAGGCGGGAACTTTGTAGAGGCGCTGGCAATGTACGATCGCGCCGTCGCCATCTCGCCGGGAAACGCCGCATGCCGGAGCAACCGCGCGGCGGCGCTCACGGCGCTGGGGAGGCTCGCCGAGGCCGCGAGGGAGTGCCTCGAGGCGGTAAAGTTGAACCCTGCTTATGCCAGGGCGCACAAGAGACTTGCTTCTCTTTATCTAAGATTTGGGCAGGTTGAGAATTCGCGGCGGCACTTGTGTCTCTCTGGGAATCAAGAGGATCAGTCTGAGGAGCAGAAGCTGGTGTTGTTGGAGAAGCATTTGAATCGATGCGCCGATGCGCGAAAATTCGGTGATTGGAAGAGGGTGCTTAGGGAATCAGAAGCAGCCATTGCTGTTGGAGCAGATTTTTCGCCTCAGATTGTTGCTTGCAAGGTGGAAGCCTATTTAAAACTGCATCAACTTGAAGATGCTGATTCCAGTCTCTTGAATGTTCCGAAGTTGGAAGGTTGTCCTCCAGCGTGTTCTCAGACCAAGTTCTTTGGTATGGTTGGCGAAGCCTATGTTCCTTTCGTGTGTGCACAGGTTGAGATGGCGTTGGGAAGGTTTGAGAATGCTGTTGCGGCTGCAGAAAAGGCTAGCATGTTAGATTACGGTAATGTTGAAGTTGGTAGGATTGTAAATGTCGTGAAAATGGTGGCAAGAGCTCGTTCGAGGGGCAATGAACTTTTCAGCTCTGGCATGTTCTCTGAAGCTTGTTCTGCTTATGGGGAGGGCCTCAAGTATGACAACTCCAACCATGTTCTATATTGCAATAGGGCAATTTGTTGGTCTAAACTTGGACTGTGGGAACAATCGGTTCAAGACTGCAGCCAAGCTCTTAACATTCAACCAAATTACACCAAGGCCCTTTTCCGCAGGGCTGCATCAAACACAAAGCTTGAAAGATGGTCCGAAGTTGTTAAAGATTACCAGGCCTTAAAACGTGAACTCCCTAACGACAATGAAGTTGCCGAGTCTCTTCGTCAGGCTCAACTAGCATTAGAAAAATCTCGACAAATGGTGTATGGTACTAGGTTTGGAGTTGAAGTTGAACAAATCTGTTCATTAGACAAATTTAAAGCTGCATTAGCCTCTGCAGGTATATCGGTAGTATACTTCAAAGAGGCATCAAATGAACTATGTGAGGAATTATCTCCATTCATAAATACATTGTGTGTTAGATATCCCTCAGTTAAATTTATCAAGGTGGACGTGGAGGAGTGTCTAGCAATAGCAAAAGCAGAAAGCATAAGAAGTGTTCCAACCTTCAAAATTTATAAAAATGGAGAGAAGGTAAAGGACATGATCCGGCCAACACATCAGTTATTAGAGGACTCAGTAAGAAAAAGTAGTAGTCTCTAG 1755 0.5014 MSNTLQQQSPESKRLDLGSNARRPCHRRSVSAGAPLIYSGGATLLPSGNICPSGKILKPGLPSRGPNRTDVLGSGTVNYGRGSIVRGGSGNIPVPAAAPPLTVKRAMSGSDPEEVKRAGNELYRGGNFVEALAMYDRAVAISPGNAACRSNRAAALTALGRLAEAARECLEAVKLNPAYARAHKRLASLYLRFGQVENSRRHLCLSGNQEDQSEEQKLVLLEKHLNRCADARKFGDWKRVLRESEAAIAVGADFSPQIVACKVEAYLKLHQLEDADSSLLNVPKLEGCPPACSQTKFFGMVGEAYVPFVCAQVEMALGRFENAVAAAEKASMLDYGNVEVGRIVNVVKMVARARSRGNELFSSGMFSEACSAYGEGLKYDNSNHVLYCNRAICWSKLGLWEQSVQDCSQALNIQPNYTKALFRRAASNTKLERWSEVVKDYQALKRELPNDNEVAESLRQAQLALEKSRQMVYGTRFGVEVEQICSLDKFKAALASAGISVVYFKEASNELCEELSPFINTLCVRYPSVKFIKVDVEECLAIAKAESIRSVPTFKIYKNGEKVKDMIRPTHQLLEDSVRKSSSL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02577 584 Pfam Thioredoxin 488 570 IPR013766 -
Gma13g02577 584 MobiDBLite consensus disorder prediction 1 25 - -
Gma13g02577 584 SUPERFAMILY Thioredoxin-like 393 577 IPR036249 -
Gma13g02577 584 MobiDBLite consensus disorder prediction 1 15 - -
Gma13g02577 584 ProSiteProfiles TPR repeat profile. 112 145 IPR019734 GO:0005515
Gma13g02577 584 Pfam Tetratricopeptide repeat 126 186 - -
Gma13g02577 584 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 2 580 IPR044534 -
Gma13g02577 584 SMART tpr_5 112 145 IPR019734 GO:0005515
Gma13g02577 584 SMART tpr_5 146 179 IPR019734 GO:0005515
Gma13g02577 584 SMART tpr_5 418 451 IPR019734 GO:0005515
Gma13g02577 584 SMART tpr_5 304 337 IPR019734 GO:0005515
Gma13g02577 584 SMART tpr_5 350 383 IPR019734 GO:0005515
Gma13g02577 584 SMART tpr_5 384 417 IPR019734 GO:0005515
Gma13g02577 584 Gene3D Tetratricopeptide repeat domain 110 468 IPR011990 GO:0005515
Gma13g02577 584 SUPERFAMILY TPR-like 111 334 IPR011990 GO:0005515
Gma13g02577 584 CDD TRX_family 490 575 - -
Gma13g02577 584 Gene3D Glutaredoxin 469 582 - -
Gma13g02577 584 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL4 2 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02577 Gma-Chr13 40628135 40630972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02577 126 197 Glycosyltransferase AT3G04240 34.722 9.65e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02577 13 40628135 40630972 Gma13g02577 13 40628135 40630972 ECH
Gma13g02577 13 40628135 40630972 Gma12g01981 12 40399070 40402007 GST
Gma12g01500 12 31592540 31595665 Gma13g02577 13 40628135 40630972 PCT