Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02436 ATGACTACCAGAGAAATCCTTCAAAAGATGAAGGTAAAAGTTGGTTTGGGTTCATCAGACCCTGACTCAGGGAAAGGAAAGAGCAAGATGTCAAAGAACATAACTCATGGTTATCATTTGGTGAAAGGAAAATCATATCATGACATGGAGGATTACGTTGTGGCTCAATTTAAGCAAATAGATAACAATGAATTGGGTTTGTTTGCAATATTCGACGGCCATGCGGGTCAGAACGTACCTAATTACTTGCGGTCCCATTTGTTTGATAATATCTTACATGAGCCTGACTTCTGGAAAGAACCTGCAGATGCTGTGAAGAGAGCATACAGTAAAACTGATTCTAATATTTTAGATATGTCGGGTGAATTAGGTAGAGGGGGTTCAACTGCAGTTACAGCAATATTAGTCAATTGTCAGAAGTTAATAGTAGCCAACATTGGGGATTCTAGGGCCGTCTTATGCAAGAAGGGTGTGGCCAAGCAACTATCAGTGGATCATGAGCCAACCGCAGAACATGAGGATATTAAAAATAGAGGTGGTTTTGTATCAAACTTTCCAGGGGATGTTCCTCGTGTTGATGGACGGCTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCTTGAAGAAACACTTGAGTTCAGAGCCATTTGTGACTGTGGAGAATATAGGTGATGATGCAGAGTTTGTTATATTAGCCAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGCTAATTGTATAAAAAATATAAAGGATGCTCGGTCTTCAGCAAAGCGCCTTACTGAAGAAGCAGTTAACAGGAAAAGCACCGATGATATCTCCTGCATCGTTGTGAAATTTCAGTGA 852 0.4061 MTTREILQKMKVKVGLGSSDPDSGKGKSKMSKNITHGYHLVKGKSYHDMEDYVVAQFKQIDNNELGLFAIFDGHAGQNVPNYLRSHLFDNILHEPDFWKEPADAVKRAYSKTDSNILDMSGELGRGGSTAVTAILVNCQKLIVANIGDSRAVLCKKGVAKQLSVDHEPTAEHEDIKNRGGFVSNFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPFVTVENIGDDAEFVILASDGLWKVMSNQEAANCIKNIKDARSSAKRLTEEAVNRKSTDDISCIVVKFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02436 283 CDD PP2Cc 36 282 IPR001932 -
Gma13g02436 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Gma13g02436 283 SMART PP2C_4 25 280 IPR001932 -
Gma13g02436 283 Coils Coil 245 265 - -
Gma13g02436 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Gma13g02436 283 Gene3D - 17 283 IPR036457 -
Gma13g02436 283 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 283 - -
Gma13g02436 283 PANTHER PROTEIN PHOSPHATASE 2C 1 283 IPR015655 GO:0004722|GO:0006470
Gma13g02436 283 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Gma13g02436 283 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02436 Gma-Chr13 39140867 39144600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02436 1 283 PP2C-type Phosphatase Gene Family AT3G15260 72.664 7.33e-157 437
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02436 13 39140867 39144600 Gma13g02436 13 39140867 39144600 ECH
Gma13g02436 13 39140867 39144600 Gma12g01533 12 34180923 34185180 PCT
Gma12g01533 12 34180923 34185180 Gma13g02436 13 39140867 39144600 PCT