Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02435 ATGGTGGGCTCAGGAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGATGCCCTCAGAAGAGTCTGTCTCAACTCAGACTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCGAGAGTCCGAGGTGGCAATGGCTGCAAGGTTGGAGACGATAGCGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCAAGGAAGGGGTTCAGGATGTCTGGAAGATATTGATGGAGAGGATCCTGTCAGAAAGGCCTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAACCAAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGACAGACCAGTTTGAGTCAGGCATTCAGACCATAGCTGTTATTCAAGCTGGACATGGTCTTCTCCAACTTGGTTCTTGCAAGATTATTCCTGAAGATCTCCGTTTTGTGCTTAGAATGAGACACACTTTTGAATCCCTTGGCTACCAATCTGGTTTCTACCTCTCTCAACTCTTCTCTTCAACAAGGAACACTTCCTCATCAACTTCTGTTCCCTCAAAACCATCCACCATTCCAATTAGGCCACCTCCTCCACTCTTCAACTGGGGTCAGAGGCCACTTTCTTCTGCCACTTCCATGCTATCCTCACCGAATTTTCAACAACATGAAGCCAGGCTTGGGTTTCCAAAAGATGAGGCGCACATGTTTCTCATGCCTCATGCATCATCTGAGGGTGCAAGAATCGAGGACATGATGGGGGAGCATGAAAACGACATAAAATGGCCCAATGGCTTGTCTTTCTTCAATGCTCTCACTGGAAGAACAGATGATGCTAAGCTCTTGTTCAATCCTGAGAGCTTGGGGAACAAACCTGGTGATCAGAATCAGCATCACACTATTGGCCAAAACCCCAATTCAGATGGATCCAACATGCAAAATGCTAGTGGTGGAACCAACCCAAATGAGTTCTTGAGCTTGGATAGCCACCAAGATGATGCAAGGAAAATGGACAAGTTTAAGAGGAGCTTCACTCTTCCTTCAAGAGTGGCCTCATCAACTTCATCCACTTCAATGGATCAACATCAACAACAACAACAACAAGGTGTGGAGTATACGAATTCAGAAGGAGGTATGTATCCGGATGTCATGGAAACCTTTTTGGAGTGA 1257 0.463 MVGSGASDRSKEAVGMMALHDALRRVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDSGSLMLMWEDGFCQGRGSGCLEDIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLRFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSVPSKPSTIPIRPPPPLFNWGQRPLSSATSMLSSPNFQQHEARLGFPKDEAHMFLMPHASSEGARIEDMMGEHENDIKWPNGLSFFNALTGRTDDAKLLFNPESLGNKPGDQNQHHTIGQNPNSDGSNMQNASGGTNPNEFLSLDSHQDDARKMDKFKRSFTLPSRVASSTSSTSMDQHQQQQQQGVEYTNSEGGMYPDVMETFLE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02435 418 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 73 IPR025610 -
Gma13g02435 418 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 87 187 IPR025610 -
Gma13g02435 418 MobiDBLite consensus disorder prediction 372 409 - -
Gma13g02435 418 MobiDBLite consensus disorder prediction 207 228 - -
Gma13g02435 418 MobiDBLite consensus disorder prediction 312 356 - -
Gma13g02435 418 MobiDBLite consensus disorder prediction 318 356 - -
Gma13g02435 418 PANTHER GB|AAF34833.1 1 418 IPR044170 -
Gma13g02435 418 MobiDBLite consensus disorder prediction 375 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02435 Gma-Chr13 39130740 39133387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02435 21 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.343 9.02e-21 93.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02435 13 39130740 39133387 Gma13g02435 13 39130740 39133387 ECH
Gma13g02435 13 39130740 39133387 Gma12g01536 12 34311592 34314599 PCT
Gma12g01536 12 34311592 34314599 Gma13g02435 13 39130740 39133387 PCT