Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01536 ATGGTGGGCTCAGGAACAACAACAACAACAGATAGAAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAAGTGTGTGTCTCAACTCAGATTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCAAGAGTGAGAGGTGGCAATGGGTGCAAGGTTGGGGATGATAACGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGAGTTTCAGATTGTTTGGAAGAGATTGATGGAGAGGATCCTATCAGGAAATCTTTTAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTTACATCTGATAAGTGCCACAAATGGGTCTTTAAAGAGCCTACGGAATGTGAGCCTAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGATAGATCAGTTTGAGTCAGGCATTCAGACAATCGCTGTGATTCAAGCTGGGCATGGCCTTCTGCAACTTGGTTCTTGCAAGATTATTCCAGAAGACCTCCATTTTGTGCTAAGAATGAGACACACTTTTGAATCTCTAGGCTATCAATCAGGGTTCTACCTCTCCCAACTCTTCTCTTCAACAAGGAACACATCCTCTTCCACTTCCCTTTCTTCAAAACCATCCTCCATTCCAACTAGGCCACCCCCTCCACTCCTCAACTGGGGTCAGAGACCACTTGGATCTTCCGCTTCTATGCTACCCTCTCCCACCTTTCAGCATGCAGCCAGAATGGGGTTCCCACAGGCCAAAGATGAGACCCATATGTTCCTCATGCCTCATGCATCAGAACATGCAAGAATGGGAGACATCATGGGGGAGCATGAGAATGACATAAAATGGCCAAATGGCTTATCCATCTTCAATGCACTCACTGGAAGATCTGATGATGCTAAACTCTTGTTCAATCAAGAGAGCTTGGGGGGCAAACCAAGTGATGATCACAATCACCACCACCACCACCACCACTCTCTCAACCCAAATAATCCCACCTCATCAGTGCAAAATGCTAATAGTGTGGCAAACCCAAATGAGTTCTTGAGCTTGGATAGCCACACTGAAGGAGGAGGGGCAAGGAAACTGGACAAGTTCAAGAGGTGCTTCACTCTACCTGCTAGAATGACTTCATCTTCATCTTCTACTTCAATGGATCACCATCAACAAGCAGGTGTGGAGTATAGGAATTCAGGAGGTAGTATGTACCAGGATGTCATGGAGACCTTTTTGGAGTGA 1272 0.4631 MVGSGTTTTTDRSKEAVGMMALHEALRSVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRVSDCLEEIDGEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLSSKPSSIPTRPPPPLLNWGQRPLGSSASMLPSPTFQHAARMGFPQAKDETHMFLMPHASEHARMGDIMGEHENDIKWPNGLSIFNALTGRSDDAKLLFNQESLGGKPSDDHNHHHHHHHSLNPNNPTSSVQNANSVANPNEFLSLDSHTEGGGARKLDKFKRCFTLPARMTSSSSSTSMDHHQQAGVEYRNSGGSMYQDVMETFLE 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01536 423 PANTHER GB|AAF34833.1 1 423 IPR044170 -
Gma12g01536 423 PANTHER GB|AAF34833.1 1 423 - -
Gma12g01536 423 MobiDBLite consensus disorder prediction 317 351 - -
Gma12g01536 423 MobiDBLite consensus disorder prediction 212 240 - -
Gma12g01536 423 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 91 190 IPR025610 -
Gma12g01536 423 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 22 76 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01536 Gma-Chr12 34311592 34314599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01536 23 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.977 7.43e-19 87.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02435 13 39130740 39133387 Gma12g01536 12 34311592 34314599 PCT
Gma12g01536 12 34311592 34314599 Gma13g02435 13 39130740 39133387 PCT