Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01533 ATGACGGGCAAAGAAATTTTTCATAAGATGAAGGAAAAAGTTTTGGGATCATCTGATCCCGATTCAGGTAAAGGAAAGAGCAAGATGAAGAAGCACATAACTCATGGCTTTCACTTGGTAAAGGGAAGATCAGGTCATGCCATGGAAGACTATCTTGTTGCTCAATTTAAGCAAGTTGACAACAAAGAGTTGGGTTTATTTGCAATATTTGATGGCCACTCTGGTCACAGTGTACCTGATTACTTGAAGTCTCATTTGTTTGATAATATCTTGAAAGAGCCTAACTTCTGGACAGAACCTGCTGAGGCTGTTAAGAGAGCATATAGTATAACTGATTCTACTATTTTAGACAAATCAGGTGAATTGGGTAGAGGGGGTTCAACTGCGGTTACAGCAATATTGATCAACTGTTACAAGCTACTAGTGGCCAATATTGGGGATTCCCGGGCTGTCTTATGTAAGAATGGCGTAGCCAAACAACTATCGGTGGATCATGAACCAAGCATAGAAAGTGAAGATATAAAAAACAGAGGTGGTTTTGTGTCAAACTTCCCAGGGGATGTGCCACGTGTCGATGGTCAGTTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGATACATTTGAGCTCAGAACCATATGTAACTGTGGAGATGATAGAAGATGATGCAGAGTTTCTTATACTAGCCAGTGATGGGTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTAGTGCTATCAGAGATGTTAAGGATGCTAGATCTGCAGCAAAGGTGCTTACTGAAGAAGCAAAGAACAGGAAAAGCTCAGATGATATCTCTTGCGTTGTTGTGAAATTTCAGTGA 849 0.4075 MTGKEIFHKMKEKVLGSSDPDSGKGKSKMKKHITHGFHLVKGRSGHAMEDYLVAQFKQVDNKELGLFAIFDGHSGHSVPDYLKSHLFDNILKEPNFWTEPAEAVKRAYSITDSTILDKSGELGRGGSTAVTAILINCYKLLVANIGDSRAVLCKNGVAKQLSVDHEPSIESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKIHLSSEPYVTVEMIEDDAEFLILASDGLWKVMSNQEAVSAIRDVKDARSAAKVLTEEAKNRKSSDDISCVVVKFQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01533 282 Pfam Protein phosphatase 2C 46 274 IPR001932 -
Gma12g01533 282 Gene3D - 28 282 IPR036457 -
Gma12g01533 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Gma12g01533 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 282 - -
Gma12g01533 282 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
Gma12g01533 282 SMART PP2C_4 24 279 IPR001932 -
Gma12g01533 282 CDD PP2Cc 35 281 IPR001932 -
Gma12g01533 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01533 Gma-Chr12 34180923 34185180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01533 1 282 PP2C-type Phosphatase Gene Family AT3G15260 76.125 9.80e-164 454
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02436 13 39140867 39144600 Gma12g01533 12 34180923 34185180 PCT
Gma12g01533 12 34180923 34185180 Gma13g02436 13 39140867 39144600 PCT