Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00881 ATGGAGGGGTCTCACATGGGGTTGTTGCTCTTCTTTTGTTCTTCCATGCTTTTTGCTGCCTTCGCTGCTGCCTCCTCCAGAAACTTGCCCATAATACCCTTTGATGAAGGCTACGCGCCCTTGTTTGGGGACAGCAACTTGGTCATCCATAGGGATGGCAAATCGGTTCATCTTTCACTCGATGAGAGAACAGGTTCAGGATTTGTGTCGCATGATCTTTACCTTCACGGATATTTCAGCGCTTCTATTAAGTTGCCTTCTGACTACACTGCAGGAGTTGTGGTTGCCTTCTATATGTCAAATGGTGACATGTTCCAGAATAACCATGATGAAATCGACTTTGAGTTTTTGGGGAACATTAGAGGCAAAGACTGGAGGATTCAGACCAATGTTTATGGCAATGGTAGCACCAACATTGGCAGAGAGGAAAGATATGGTCTGTGGTTTGACCCTGCAGATGATTTCCATCAGTACACTATTGTCTGGACAGACTCTCAGATCATATTTTATGTGGACAATGTTCCTATTAGAGAAGTGACTCGAACAGAATCTATGGGAGGGGATTTCCCTTCTAAGCCAATGACTTTGTATGCAACAATATGGGATGCATCTGATTGGGCTACCAATGGGGGCAAATACAGGGTTAACTACAAGTATGCACCCTATGTTGCTGAATTCTCTGACCTTGTTCTGCACGGTTGTGCAGTGGATCCAATTGAGCAGCACGTGGCCAAGTGTGACAATGCTCCTCAAAGTTCTGAGGCAACTACAACAATTCCTTCTTCTGGTGTTACACCAGCACAAAGAATCAAAATGGAGAATTTCAGGAAGAAGCACATGACATACTCCTACTGCTATGACAAAGTCAGATACAAAGTCCCTCCTTCGGAGTGTGTCATCAGTTCCCAAGAAGCTGAGAGGCTGAGGAGGTTCGATCCCGTCACATTTGGAAGCGGCCGCCGTCACCATGGAAAACGACACCGTCGCAGCAGAGGAAGCCAGACAGAAGCCGCTGCTTCATTTTAA 1026 0.46 MEGSHMGLLLFFCSSMLFAAFAAASSRNLPIIPFDEGYAPLFGDSNLVIHRDGKSVHLSLDERTGSGFVSHDLYLHGYFSASIKLPSDYTAGVVVAFYMSNGDMFQNNHDEIDFEFLGNIRGKDWRIQTNVYGNGSTNIGREERYGLWFDPADDFHQYTIVWTDSQIIFYVDNVPIREVTRTESMGGDFPSKPMTLYATIWDASDWATNGGKYRVNYKYAPYVAEFSDLVLHGCAVDPIEQHVAKCDNAPQSSEATTTIPSSGVTPAQRIKMENFRKKHMTYSYCYDKVRYKVPPSECVISSQEAERLRRFDPVTFGSGRRHHGKRHRRSRGSQTEAAASF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00881 341 Pfam Glycosyl hydrolases family 16 38 218 IPR000757 GO:0004553|GO:0005975
Gma08g00881 341 PIRSF EndGlu_transf 3 303 IPR016455 GO:0010411|GO:0016762|GO:0042546
Gma08g00881 341 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 301 IPR013320 -
Gma08g00881 341 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 10 319 IPR044791 GO:0004553
Gma08g00881 341 MobiDBLite consensus disorder prediction 311 341 - -
Gma08g00881 341 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 24 226 IPR000757 GO:0004553|GO:0005975
Gma08g00881 341 CDD GH16_XET 32 298 IPR016455 GO:0010411|GO:0016762|GO:0042546
Gma08g00881 341 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 262 298 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Gma08g00881 341 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED 10 319 - -
Gma08g00881 341 Gene3D - 19 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00881 Gma-Chr8 7266440 7268554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00881 6 337 Glycoside Hydrolase AT1G14720 65.179 1.45e-165 463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00881 08 7266440 7268554 Gma08g00881 08 7266440 7268554 ECH