Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00866 ATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTACGAACCCTTCAGAGGGGGACATCTTGGCCTTCAGCTCATGCCTGGTATGACTGAACGGGACACAAAGCCATTTTTGCCTGGTCGGGATCCTGCTATGTTAATGGGTGCTAATGGAACTTTTCACCCTCGAGATTGCGTTGTTTCCGAGGCACCAATGCCATTGAACTATGTCAGAGATAGTTGGATAAACCAGAGAGATAGGTTTTTTCATATGCAGCAGCCCACAAATCCTAATTATGCTGTTCTTCCGGAGACATCAGGAGCTCCTAACTTGAAAATTATACAGCCACCCGATACGTCAAGAGATGAGAAAGTGGATAGAGTTGAAGAGGTCGTTGTCAAAAAGGAACTGGGCAAGTCGAAGAAAAGGCACACTAAGGGTGCTCTGTCGACTCCAAAAGCTAAGAAACCTAGGAAGCCGAAGGATAATAGCAATGTTCCAGTTCAACGTGCGAAGCCACCGAAGAAGACTATGGAGCTTGTAATTAACGGAATTGATATGGACATTTCTGACCTACCAATTCCAGTTTGTTCGTGTACTGGGGCTCCTCAGCAGTGTTATCGATGGGGTTGCGGAGGTTGGCAATCGGCTTGTTGCACCACAAATGTGTCAATATATCCTTTGCCAATGAGCATGAAAAGGCGTGGTGCAAGGATAGCTGGGCGGAAAATGAGCCAAGGTGCTTTTAAAAAGGTTTTAGAGAAACTTGCAGCTGAAGGTTATAACTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCCAGACATGGCACCAACAAGTTTGTCACTATCAGGTAG 840 0.4548 MDDDVLNMPNWGYYEPFRGGHLGLQLMPGMTERDTKPFLPGRDPAMLMGANGTFHPRDCVVSEAPMPLNYVRDSWINQRDRFFHMQQPTNPNYAVLPETSGAPNLKIIQPPDTSRDEKVDRVEEVVVKKELGKSKKRHTKGALSTPKAKKPRKPKDNSNVPVQRAKPPKKTMELVINGIDMDISDLPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00866 279 MobiDBLite consensus disorder prediction 111 131 - -
Gma08g00866 279 SMART GAGA_bind_2 1 279 IPR010409 -
Gma08g00866 279 MobiDBLite consensus disorder prediction 93 170 - -
Gma08g00866 279 MobiDBLite consensus disorder prediction 132 148 - -
Gma08g00866 279 Pfam GAGA binding protein-like family 1 279 IPR010409 -
Gma08g00866 279 PANTHER - 1 279 IPR010409 -
Gma08g00866 279 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00866 Gma-Chr8 7144041 7145988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00866 1 279 BBR or BPC Transcription factor family AT2G01930 56.711 8.04e-107 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Gma08g00866 GAGA_bind 1.1e-104 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00866 08 7144041 7145988 Gma08g00866 08 7144041 7145988 ECH
Gma05g01383 05 35504180 35506142 Gma08g00866 08 7144041 7145988 GST