Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01618 ATGTCATCACAAACAGCCGCCTCCATGGAGGCGCCGGAGTCCCACGCGCCGCTGCTCCGCCCCCTCACCGATGCCAGCCGAGCCCCCGTCCCCACGCTCGCGCTCCTCCTCGGTCGCGCCGGCCGTCGCGGTCCCTCCATGCTGGTGCGGGAGACGGCAGCGCGTGAGCTTGAGGAGCGCCGGGCCGACTGGGGTTACTCCAAGCCGGTGGTGGCGCTTGACATGTCGTGGAACATGGCCTTCGTCGTCGTCACGGCGGTGATGCTCGCATGCACTACCGCCGAGCGCCCGAACACGCCGATCCGCGTGTGGATCGTTGGCTACGCGCTGCAGTGCCTCGTGCACGTGTTGCTCGTGTGGCTCGAATACCGTCGCCGGAGCCGGAGGGACTCGCACCACGGCCAGAGAGCGCGGGACGTGGAGAGCGACGCCGGCAGCGGTGACGAAGACTACAGTGACGACAGAGATTGGAGCTCTGGCTACTCGTCTCGCTCCCGCTTCACAAAACGATGTGAGTTGTTAAATACTGGGGTTTCATTCCTTTGGTGGATAGTGGGCTTTTATTGGGTTGTCTCTGGTGGCAATATACTTCTGCAAGATGCCCCACGATTGTACTGGTTGGTTGTTGTCTTTCTGGCATTTGATGTCTTTTTTGCCATCTTCTGTGTTGTCTTGGCTTGCTTGATTGGCATTGCTCTCTGTTGTTGTTTGCCCTGCATCATTGCTATTCTCTATGCTGTTGCAGGACAGGAAGGTGCATCAGAAGCAGATCTTAGCATGCTTCCAAAATACAGATTTAGAATATTAAGCGATGAGGATAAGCCTAGTGGTGGAGCTGGATCTATGGTTCCCATAGAAACCAGCAGCGCTTACTTGGCAAATGAACGAACACTTCTACCTGAGGATGCGGAATGTTGTATATGCCTTTGTTCATATGAGGATGGAGCAGAGCTGCATGCTCTTCCCTGCAATCATCATTTCCATTCTTCATGCATTGTGAAATGGCTGAAGATGAATGCAACTTGTCCTCTCTGCAAGTACAATATTCTAAAGGGAAACGAACAAGTGTGA 1071 0.549 MSSQTAASMEAPESHAPLLRPLTDASRAPVPTLALLLGRAGRRGPSMLVRETAARELEERRADWGYSKPVVALDMSWNMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRDSHHGQRARDVESDAGSGDEDYSDDRDWSSGYSSRSRFTKRCELLNTGVSFLWWIVGFYWVVSGGNILLQDAPRLYWLVVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYRFRILSDEDKPSGGAGSMVPIETSSAYLANERTLLPEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01618 356 MobiDBLite consensus disorder prediction 134 162 - -
Gma07g01618 356 Pfam Ring finger domain 304 346 IPR001841 -
Gma07g01618 356 MobiDBLite consensus disorder prediction 134 160 - -
Gma07g01618 356 MobiDBLite consensus disorder prediction 1 21 - -
Gma07g01618 356 ProSiteProfiles Zinc finger RING-type profile. 305 346 IPR001841 -
Gma07g01618 356 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 10 356 - -
Gma07g01618 356 SUPERFAMILY RING/U-box 293 350 - -
Gma07g01618 356 SMART ring_2 305 345 IPR001841 -
Gma07g01618 356 CDD RING-H2_PA-TM-RING 304 346 - -
Gma07g01618 356 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 351 IPR013083 -
Gma07g01618 356 PANTHER TARGET OF ERK KINASE MPK-1 10 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01618 Gma-Chr7 32816068 32829862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01618 7 355 C3H Transcription Factor Family AT1G68070 66.289 2.27e-170 476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01618 07 32816068 32829862 Gma02g00764 02 7464833 7469990 GST