Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02309 ATGGCGAAAAGGAGCAATATCTCACACACACTATTGAGTAGTATGTATGTTTTTTTGTGCGTGGTTGGGTTTTCGGAGTGTTCGAGCATAAGCACGTTCCTCTACAGCGGGTGCACGCAGCAACGGTACACTCCCAACTCGCCCTACGAGTGGAATAtcaactcgttactcacctcgctggtgaactcggcgacgtactctgcttataacaacttcacggtcgtggggtccactcagcaggacgcggtgtacgggctctaccagtgccgcggcgacctcgccatgccggactgcgccgcctgcgtggcccgagccgtcacgcgcgccggcgacatctgccgcggcacgtgcggcggcgcggtgcagctcgacggctgcttcgtgaagtacgacaacgccacgttcctcggcgcggcggacaagacggtggtgcTGAAGAAGTGCGGGCCGTCGGTCGGGTACAACCCCGACGCCATGGGGAGCCGCGACGCCGTGCTCGCCGGACTCGCCGCCGCCGGTGGGAACTTTCGCGTCGGTGGGTCCGGTGGGGTACACGGCGTGGCGCAGTGCACCGGCGACCTGAGCTACGGGGAGTGCCAGGACTGCGTGGCGGAGGCGATCTCGCGCCTGAAGAGCGATTGCGGCACAGCGGATTACGGTGACATGTTTCTCGGGAAGTGTTACGCGAGGTACTCCGTTGGTGGGGCCCACGATGAGTCCAAGGCCCACGACAAATCGAATCATGGAGGTGTAAAGACATTTTCTATAATTATTGGATCATTAGCGGGAGTGGCCATACTTATTATTTTCTTTGCTTTCATGAGCAAGATTTGTGGGCGACAGGGTAAATAA 852 0.3779 MAKRSNISHTLLSSMYVFLCVVGFSECSSISTFLYSGCTQQRYTPNSPYEWNINSLLTSLVNSATYSAYNNFTVVGSTQQDAVYGLYQCRGDLAMPDCAACVARAVTRAGDICRGTCGGAVQLDGCFVKYDNATFLGAADKTVVLKKCGPSVGYNPDAMGSRDAVLAGLAAAGGNFRVGGSGGVHGVAQCTGDLSYGECQDCVAEAISRLKSDCGTADYGDMFLGKCYARYSVGGAHDESKAHDKSNHGGVKTFSIIIGSLAGVAILIIFFAFMSKICGRQGK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02309 283 ProSiteProfiles Gnk2-homologous domain profile. 136 236 IPR002902 -
Gma02g02309 283 Pfam Salt stress response/antifungal 38 132 IPR002902 -
Gma02g02309 283 Pfam Salt stress response/antifungal 181 232 IPR002902 -
Gma02g02309 283 ProSiteProfiles Gnk2-homologous domain profile. 31 135 IPR002902 -
Gma02g02309 283 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 8 280 - -
Gma02g02309 283 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 8 280 - -
Gma02g02309 283 Gene3D - 30 135 IPR038408 -
Gma02g02309 283 Gene3D - 159 234 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02309 Gma-Chr2 49159473 49161214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02309 12 240 Receptor kinase-like Gene Family AT4G05200 26.016 2.97e-16 77.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02081 14 51948173 51950480 Gma02g02309 02 49159473 49161214 GST
Gma18g00385 18 3439614 3441632 Gma02g02309 02 49159473 49161214 PCT
Gma02g02309 02 49159473 49161214 Gma18g00385 18 3439614 3441632 PCT