LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma02g00772	ATGGTGTCAAAATCCTATTCAAACCTATTGGAGTTGGCCTCTGGAGAGGCTCCGTCATTTGGGTACATGAACAGGAGAATTCCAAGGATTATGACTGTGGCTGGGTTGATATCTGATGTTGATGATGACCCAGTGGAGAGTGTGTGCTCTGATCCGTCGTCGTCAACCGCGCACCGAGACCGGATAATCATGGTGGCTAATCAGCTTCCCATAAGGGCTCAGAGGAGACCAAATGGGAATAATAGGAGTTGTTGGTCTTTTGAGTGGGATGAGAATGCACTTCTTCAGCTGAAAGATGGGTTAGGGGATGATGATATTGAGGTCATTTATGTTGGATGCCTTAAGGAGGAGGTTCATCCAAGTGAACAAGATGAAGTTTCACAGACACTTCTTGAGACCTTCAAGTGTATCCCGACTTTTCTCCCCGCTGACCAGTTTACTAAGTACTATCATGGTTTTTGCAAGCAGCAGTTGTGGCCACTGTTCCATTACATGTTGCCCTTGTCACCTGAGCTCGGTGGCAGGTTTAATAGGTCACTGTGGCAGGCTTATGTGTCAGTCAATAAAATTTTTGCAGATAGGATTATGGAAGTTATTAACCCTGAAGATGATTATGTGTGGATACACGATTATCATCTGATGGTGTTGCCGACTTTCTTGAGGAAGAGATTCAACAGGGTGAAACTGGGCTTCTTCCTTCACAGTCCATTCCCTTCATCAGAAATATATAAAACATTGCCTGTTAGGGAAGAGATCCTGAGAGCCCTCCTTAATTCGGATTTGATCGGCTTCCACACTTTCGATTATGCGCGGCATTTCCTCTCCTGTTGTAGCCGGATGCTTGGCCTTACCTACGAATCCAAGCGGGGATATATTGGGATTGAGTACTATGGTAGGACTGTTAGTATCAAAATTCTTCCTGTCGGTATTCACTTGGGTCAGCTTCAATCGGTTTTGAGGATGCCTCAGACTGAAGAAAAAGTTTGCGAGCTCATTAGACAGTTTTCTGATAAAGGCAGGACATTGTTGCTTGGTGTGGATGACATGGATATTTTCAAGGGAATAAGTTTGAAGTTGTTGGCCATGGAGCAGCTTCTCATTCAGCATCCTGAGTATCGGGAAAAGGTGGTGCTGGTCCAGATAGCTAATCCTGCGAGGGGGCGAGGGAAAGATGTGAAAGAAGTGCAAGCCGAGACGAAGGCCACGGTGAAACGAATTAATGAAACATTTGGGAAACCCGGGTATGATCCCGTCATTCTGATCGAGGAGCCTCTCAAGTTTTATGAGAGAGTTGCTTACTATGTTGTCGCGGAGTGTTGTTTAGTCACTGCAGTAAGGGATGGAATGAATCTCATACCGTATGAATATATCATCAGTCGTCAAGGAAATGAAACCTTGGATAAAGTTTTGGGTCTAGCTTCCTCCCCTAAGAAGAAAAGCATGTTAGTTGTGTCTGAATTCATTGGCTGTTCCCCATCTTTAAGTGGAGCAATCAGAGTGAACCCCTGGAATATTGATGCAGTAGCTGATGCAATGGACTCGGCGCTGGAAATGGCTGATTTGGAGAAGGAGCTTAGGCATGAAAAGCATTATAGATATGTTAGTACTCATGATGTCGGGTACTGGGCTCGAAGCTTCTTGCAAGATTTGGAAAGGACCTGTAGTGATCATGTGCGACGAAGGTGGTGGGGGATTGGTTTTGGATTAAGCTTTAGAGTTGTTGCGCTTGATCCAAACTTCAAGAAGCTCTCAATGGAGCACATAATTTCAGCTTACAAGCGGACGGCAACTAGGGCAATCCTTCTTGACTACGATGGTACACTAATGCCTCAATCATCCACCATTGATAAGAGTCCAAGCAGTAAATCCATTGAAATTCTTAGTAGTTTGTGTAGAGATAAGAACAACATGGTTTTCCTTGTTAGTGCTAGAAGCCGAAAGATGCTTTCTGAATGGTTTTGTCCTTGTGAGAATCTGGGAGTTGCAGCTGAGCATGGTTACTTTCTAAGGCAACGAGATGAAGAGTGGGAAACACATGTTGCGGCAACAGACACTAGTTGGAAACAAATTGCAGAACCTGTAATGAAACTTTATACTGAAACAACCGATGGATCCACCATTGAAGACAAAGAGACTGCACTTGTTTGGTGCTATGAGGATGCAGATCCAGACTTTGGATCATGCCAAGCTAAGGAACTTCTCGATCATCTTGAAAGTGTGCTTGCAAATGAACCAGTAACGGTCAAGAGTGGCCAGAGCAATGTAGAGGTTAAACCACAGGGTGTTAGCAAGGGACTAGTGGCCACACGCCTACTTTCTGCCATGGAAGAAAAGGGGATGTGCCCTGATTTTGTTTTGTGTATAGGCGATGACAGGTCTGATGAAGACATGTTTGAGGTAATCACCAGTTCGATGGGGAGTCCGATCGCGGCAAAGGCCGAGGTATTCGCGTGCACGGTTTGTCGAAAACCCAGTAAGGCTAAGTACTACCTGGATGATACAACTGAAATAGTGAGATTGCTTCAGGGCTTAGCCTGTGTTTCAGAACAAATAGACAAATAG	2562	0.4477	MVSKSYSNLLELASGEAPSFGYMNRRIPRIMTVAGLISDVDDDPVESVCSDPSSSTAHRDRIIMVANQLPIRAQRRPNGNNRSCWSFEWDENALLQLKDGLGDDDIEVIYVGCLKEEVHPSEQDEVSQTLLETFKCIPTFLPADQFTKYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPVREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHLGQLQSVLRMPQTEEKVCELIRQFSDKGRTLLLGVDDMDIFKGISLKLLAMEQLLIQHPEYREKVVLVQIANPARGRGKDVKEVQAETKATVKRINETFGKPGYDPVILIEEPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNETLDKVLGLASSPKKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADLEKELRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIISAYKRTATRAILLDYDGTLMPQSSTIDKSPSSKSIEILSSLCRDKNNMVFLVSARSRKMLSEWFCPCENLGVAAEHGYFLRQRDEEWETHVAATDTSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQSNVEVKPQGVSKGLVATRLLSAMEEKGMCPDFVLCIGDDRSDEDMFEVITSSMGSPIAAKAEVFACTVCRKPSKAKYYLDDTTEIVRLLQGLACVSEQIDK	853

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma02g00772	853	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	1	851	IPR001830	GO:0003824\|GO:0005992
	Gma02g00772	853	SUPERFAMILY	HAD-like	598	845	IPR036412	-
	Gma02g00772	853	PANTHER	ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6	1	851	-	-
	Gma02g00772	853	Pfam	Glycosyltransferase family 20	61	551	IPR001830	GO:0003824\|GO:0005992
	Gma02g00772	853	CDD	GT20_TPS	61	551	IPR001830	GO:0003824\|GO:0005992
	Gma02g00772	853	CDD	HAD_TPP	599	839	-	-
	Gma02g00772	853	Pfam	Trehalose-phosphatase	601	834	IPR003337	GO:0003824\|GO:0005992
	Gma02g00772	853	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	60	554	-	-
	Gma02g00772	853	TIGRFAM	T6PP: trehalose-phosphatase	597	844	IPR003337	GO:0003824\|GO:0005992
	Gma02g00772	853	TIGRFAM	HAD-SF-IIB: HAD hydrolase, family IIB	600	801	IPR006379	-
	Gma02g00772	853	Gene3D	-	727	853	IPR023214	-
	Gma02g00772	853	Gene3D	-	597	726	IPR023214	-
	Gma02g00772	853	Gene3D	Glycogen Phosphorylase B;	53	316	-	-
	Gma02g00772	853	Gene3D	Glycogen Phosphorylase B;	317	535	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma02g00772	Gma-Chr2	7558812	7562482	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma02g00772	1	851	Trehalose Biosynthesis Gene Families	AT1G68020	79.653	0.0	1427

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma02g00772	02	7558812	7562482	Gma02g00772	02	7558812	7562482	ECH
	Gma07g01640	07	33501475	33506050	Gma02g00772	02	7558812	7562482	GST