Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00770 ATGGCTCCCTGTGCGGCTGCGGCGGAGTTTCCGGTGGGTCTCCGGGTTCTTGTGGTCGACGACGACGCCACCACGTTGAAGATTATCGAGCAAATGTCCATTCGCTGCCGTTACCGCGTTACCACATGCACTGAGGCTACTGTGGCTTTGAATCTTCTGCGGGAAAGGAAAGGTTGTTTTGATGTGGTGCTGAGTGATGTTCATATGCCAGACATGGATGGCTATAAACTCCTTGAACATGTTGGGCTGGAAATGGACCTTCCCGTAATTATGATGTCTGGTGATAGTACTACAAGTGCTGTCATGAAGGGAATCAGGCATGGGGCTTGTGATTATTTGATTAAGCCTGTACGTGAGGAAGAACTAAGGAATATATGGCAGCATGTTGTTCGGAAATTCTGGAATGACAATAAAGAACTGGATAATTCTGGCAGCATGGAGGACAGTGATCGAAATAAATGGGGGAATGATGACGCTGAATATACTTCTTCTGTTGCTGATGCAGCAGAAGTAGTTAAAGCACCAAAAAAGAGGAGCAGTTTAAAAGAAGAAGATATTGAATTGGAGAGTGATGATCCAGCTACATCTAAGAAGCCCCGTGTAGTGTGGTCAGTAGAACTGCATCAACAATTTGTCAGTGCTGTGAATCAACTTGGGCTTGACAAGGCTGTGCCAAAGAGAATACTTGAATTGATGAATGTCCCTGGTTTGACAAGAGAAAATGTTGCAAGTCATTTGCAGAAATTTAGACTTTACTTGAAGCGATTAAGTGGAGTGGCACAGCAACAGAATGGGATGCTAAATGCAATTCCAGGGACTATAGAATCCAAGCTGGGTGCTACTGGAAGATTTGACATACAAGCTTTGGCTGCTGCTGGCCATGTTCCCCCTGAAACACTTGCAGCCCTTCATGCTGAGCTCTTAGGTCACCCGGCAACTCACATGATGTCTACAGTGGACCAGACTACCCTACTGCAAGCATCGATACAGGGGCTAAAACATTCCCATGCTGAACATGCTGTGGCGTATGGTCAGCCTCTTGTAAAGTGTCATTCCAACATTGGCAAGAATTTCTCTCCATCTATCTTAACTGTAAATGATACGTCATCAGGATATGGTACATGGCCATCATCTAATAATACAATTGGTTTAGTGAGACCCAATAGTAGTGTTGAAAGGGTGGGTATTCAGAATAACAACATGCTGATGGATATATTAGAGCACCAACAAAGCCAGCAGCACCAGCAAAAGCAACAGCTGCAGCAGCAGTCACTGATACATGATCAAAGTTGTTCAATCAATGTTCAACCATCTTGCATGGTGGTTCCCTCTCAATCCTCTGACACTTTCCAGGCAGTAAATAGTCCTGCTTCTGTCAACCAGGATTTCAGTTTTGCCAGGAATGCCATTATTGATTATAGTCTATTGTCACAAAAATCAAAGAATTCATTTAGTGCATCTCAATTTCCTGGTGGGGACACAAAAGCTCGAGGTGTTCTCTATGGGTATTCTACACCCTCCACTTGTTCAACAAGCTCCAGCAATGGCAATAGACAACAGCTTCAAAACTCCACTTTAACATTTGGTGCTGCAAGACCTTTGCCTAGTCTTTTGCCCATGTCTGACAGAAAAGATCCCTATGGTTTTAAATCAGGTGATTTACTTGATCAAGTATGCTTTAGGAATCTTGGGTTTGTTGGCAAAGGTACCTGCATTCCGAGTAGGTTTGTAGAAAATGAAATTGAGTCATCTAAAGATATCCATCTCGTGATCATTCACGTGTGTTCACTGAATAGGTTCAAATATTTGTTGAGAAGGCCTTTCTATACAGTTTGGTCCAACTCCATCAAATTTTTCTTCACCCAAATGGATCAAGGAAGAGATTCTGCACTTACCCAGATGAGGAAATCCGTTGAGAAGCTTGGTTCTTCTGCAGAGGGGTATGGGGACCCTACGTTGATGAGGTTTTTGATAGCTCGATCGATGGAGGTGGATAAAGCAGCAAAGATGTTTCTGCAGTGGAAGAAGTGGAGGTCTGCCATGGTGCCAAATGGATTCATTTCAGAATCTGAAATTCCGGATGAATTGGAAGCAAGGAAGATCTTCTTGCAGGGGTTGTCTCAGGATAAATTCCCTGTCATGATTGTTCAAACCAACAGACATTTTGCTTCCAAGGATCAGATTCAATTCAAGAaaTTTGTTGTatatctactggacaagacaattgcaagTGCTTTCAAAGGAAGGGAGATAGGAACTGAAAAGTTGATTGGAATTATTGATCTGCAGAATATTTCATATAAAAATATTGATGCACGTGGGTTAATCACAGGTTTTCAATTTTTACAGGCTTACTACCCAGAACGTTTAGCAAAATGCTATATGTTACACATGCCATGGTTTTTTGTGAGTGTTTGGAAACTAGTTTCTCGCTTCCTAGAGAAGGCTACATTAGAAAAGATTGTAATTGTATCCAATGAGGATGAGACAAGGGAGTTTGTAAGAGAGGTTGGTGAAGAAGTTCTCCCAGAAATGTATGGTGGAAGAGCTAAGCTTGAAGCTATCCAAGATGTTGAATTGCCACCCCTAGAAAACGGAACAACAAACTGA 2610 0.4211 MAPCAAAAEFPVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQHVVRKFWNDNKELDNSGSMEDSDRNKWGNDDAEYTSSVADAAEVVKAPKKRSSLKEEDIELESDDPATSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQNGMLNAIPGTIESKLGATGRFDIQALAAAGHVPPETLAALHAELLGHPATHMMSTVDQTTLLQASIQGLKHSHAEHAVAYGQPLVKCHSNIGKNFSPSILTVNDTSSGYGTWPSSNNTIGLVRPNSSVERVGIQNNNMLMDILEHQQSQQHQQKQQLQQQSLIHDQSCSINVQPSCMVVPSQSSDTFQAVNSPASVNQDFSFARNAIIDYSLLSQKSKNSFSASQFPGGDTKARGVLYGYSTPSTCSTSSSNGNRQQLQNSTLTFGAARPLPSLLPMSDRKDPYGFKSGDLLDQVCFRNLGFVGKGTCIPSRFVENEIESSKDIHLVIIHVCSLNRFKYLLRRPFYTVWSNSIKFFFTQMDQGRDSALTQMRKSVEKLGSSAEGYGDPTLMRFLIARSMEVDKAAKMFLQWKKWRSAMVPNGFISESEIPDELEARKIFLQGLSQDKFPVMIVQTNRHFASKDQIQFKKFVVYLLDKTIASAFKGREIGTEKLIGIIDLQNISYKNIDARGLITGFQFLQAYYPERLAKCYMLHMPWFFVSVWKLVSRFLEKATLEKIVIVSNEDETREFVREVGEEVLPEMYGGRAKLEAIQDVELPPLENGTTN 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00770 869 CDD SEC14 693 848 IPR001251 -
Gma02g00770 869 SUPERFAMILY CRAL/TRIO N-terminal domain 606 686 IPR036273 -
Gma02g00770 869 Coils Coil 403 423 - -
Gma02g00770 869 Gene3D - 194 257 - -
Gma02g00770 869 SMART REC_2 14 126 IPR001789 GO:0000160
Gma02g00770 869 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 251 IPR006447 GO:0003677
Gma02g00770 869 CDD REC_typeB_ARR-like 16 130 - -
Gma02g00770 869 Gene3D - 620 860 IPR036865 -
Gma02g00770 869 SUPERFAMILY CRAL/TRIO domain 690 852 IPR036865 -
Gma02g00770 869 Pfam CRAL/TRIO domain 700 848 IPR001251 -
Gma02g00770 869 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 455 IPR045279 GO:0009736
Gma02g00770 869 Pfam Myb-like DNA-binding domain 200 248 IPR001005 -
Gma02g00770 869 SMART sec14_4 695 851 IPR001251 -
Gma02g00770 869 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 11 455 - -
Gma02g00770 869 MobiDBLite consensus disorder prediction 172 194 - -
Gma02g00770 869 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 254 IPR017930 -
Gma02g00770 869 Pfam Response regulator receiver domain 16 125 IPR001789 GO:0000160
Gma02g00770 869 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 689 854 IPR001251 -
Gma02g00770 869 Gene3D - 14 148 - -
Gma02g00770 869 SUPERFAMILY Homeodomain-like 195 255 IPR009057 -
Gma02g00770 869 SUPERFAMILY CheY-like 13 135 IPR011006 -
Gma02g00770 869 ProSiteProfiles Response regulatory domain profile. 15 130 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00770 Gma-Chr2 7526656 7538129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00770 48 312 Response Regulator Gene Family AT3G16857 54.355 9.66e-88 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Gma02g00770 CRAL_TRIO 3.7e-24 CL0512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00770 02 7526656 7538129 Gma02g00770 02 7526656 7538129 ECH
Gma07g01633 07 33232367 33239307 Gma02g00770 02 7526656 7538129 GST