Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3129 ATGTTACCAAGGGAAAGGGATAGGAATAAAGATTGGATTAGTGCTCTCATGAATAGCAGCTTTGGCTATTGTGATGATCACCATGACCTTCGTTCTAATGAGAAGAATGTGTTCTGTATAGACTGTGCATTTAGATTGTGTAGGCACTGCAAGGAAGCTCATTCCCTTCACAGAAGGTTTCAGATATACAAATATTCCTATCAGGATGTATTCCGCCATTCCGAGCTGCAGAAGTACTTTGACTGCTCAAAAATTCAGACTTACATATCCAATAATGAAAGGATTGTGCATCTCAAACCCCGACCTTCAACCAATAAATCTAAATTTGCTGATCTAAGCCCTGAATCTAAATCTAAAGAATCCAATTTAGCGGCAAGAACAAAGTCGGGTGGTACATGTGAAGAGTGTGGGAAACACTTACAAGATGAGCGTAATCGCTTCTGCTCCATTACTTGCAAGGTCTCAGTGCTTCCAGTGGAGCCCCAAAACCAAGGTCAAAATCACTGTTCACACAGTCGTTCAGCAGAGCCTGTCAGTCAAAATGCTAGATTCATCAACACTCCAAAGCCTGAAGCAAGTGATTTTGCTTTGAGTGATAACCAAAATTCAGAACCGGAGTCATCTATATCTGAAGCTGAGCCATATGGATGGGTTAAAATGGTGAATTACAGAAAGCGCCCAAGGAAAACCACCCCTCAGAGGCCTATTTTTGTTTTCATGTCTTAG 726 0.4146 MLPRERDRNKDWISALMNSSFGYCDDHHDLRSNEKNVFCIDCAFRLCRHCKEAHSLHRRFQIYKYSYQDVFRHSELQKYFDCSKIQTYISNNERIVHLKPRPSTNKSKFADLSPESKSKESNLAARTKSGGTCEECGKHLQDERNRFCSITCKVSVLPVEPQNQGQNHCSHSRSAEPVSQNARFINTPKPEASDFALSDNQNSEPESSISEAEPYGWVKMVNYRKRPRKTTPQRPIFVFMS* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3129 241 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 235 - -
Dod04g3129 241 MobiDBLite consensus disorder prediction 99 124 - -
Dod04g3129 241 MobiDBLite consensus disorder prediction 190 209 - -
Dod04g3129 241 ProSiteProfiles Zinc finger B-box type profile. 19 62 IPR000315 GO:0008270
Dod04g3129 241 MobiDBLite consensus disorder prediction 190 210 - -
Dod04g3129 241 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 235 - -
Dod04g3129 241 MobiDBLite consensus disorder prediction 106 124 - -
Dod04g3129 241 Pfam PLATZ transcription factor 64 154 IPR006734 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Dod04g3129 PLATZ 3.9e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3129 04 54925218 54927038 Dod04g3129 04 54925218 54927038 ECH