Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3118 ATGGGCGAAGACATCGTTGAGAGAGCATTTAGGAGCTTAGGAAAAGGCTTCGACTTGACCTCAGATTTCAAGCTCAAATTCTGCAAAGGCGAAGAGCGTTTGGTTGTTCTGAATGAAACAGAGAGAAGGGAGGTCAGGGTGCCAGGTTTCGGAGCCACCAGAGACGTCTCTGTTGATATCAAATGCGACAAAGGCGACCGCATGCGCTACCAGTCCGATATCCTCACCTTCACCCAAATGTCAGAGCTGTTCAACCAGAGAAGCTCAATTCCTGGGAAAATACCATCTGGGTACTTCAATACCGTGTTTGGGTTTGATGAAGGTTCATGGGCAGCTGATGCAGCTAATACCAAGCACTTGGGTCTATATGGCTATTTCATCACTCTCTTCAATGTTCATATTGATCGCTACCCACTTCTCCTCTCCAAACAAGTCCTTGAAGCCGTTCCTTCTTCCTGGGATCCTCCGGCACTTGCAAGGTTCATTGAGAATTTTGGGACACACATCCTTGTTGGGCTTAGCATTGGTGGCAAAGATTTGGTGCTAGTCAAGCAAGATGTGTCTTCCAACTTAGGGCCATCAGAGCTCAAGAAGCATTTGGATGATCTTGGAGATCAGTTATTCACTGGGACATGCAATTTCCTTCCGAAAACCAAAGAGCAGAAGTACAAGGTACCACAGGCTTTTGATGTCTTTGGTCCGCAAATTGTTGCCTTCAATAGCTCCACATCCGTTTGTGCAAAAGATGGAATTACGGTGATATGTTCAAAGAGTGGAGGAGATACCCAAGTGAGCAACCATTGTGAGTGGCTTCTCACAGTTCCCAAGAAGCCAGATGCTGTTCATTTTAACTTCATTCCCATCACTTCTCTTCTTAAAAATGCTCCTGGCAGAGGCTTCCTTTCACATGCTATCAACCTCTATCTTCGATATAAACCTCCCATGTCAGATTTGGCATATTTCCTTGACTTCCAAGCACACAAGCTCTGGGCTCCTGTTCACAATGATCTGCCTCTGGGTCCTGTCACAAATAGAACTACCCTCTCACCATTTCTCAGCTTCAACTTGATGGGTCCCAAGCTTTATGTCAACACCGCTAAGGTAACAGTGGGGAATAAAAGGCCAATCACAGGGATGCGGTTGTTTCTGGAGGGCATGAAATGCAACAGATTAGCCATACACCTGCAACATCTAATCAACACTCCAATAATGTTCGACGGGAAAATAGAGGACACGACAATATGGTCAGAAGAAGTCAACGATGACCGTTTCTTCGAAGCAATCAACGGGAAGAAATTTTCCCACGTATGCACGGCACCAGTGAAGTACAATCCTAGATGGAGCACTGGCACTGATAATGATGTGGCCTTCATTGTCACGGGAGCACAACTTCATGTGAAGAAACACGACTCAAGGAATGTTCTTCATCTGAGGCTGTTGTTCTCTAAGGTGGCTAATTCTATTGTTGTGAAATCAAAATGGACACAGGGGTCCTCCGGGTTGTCCCAGAAGTATGGAATCTTCTCAGCAATAAGCACATCAATTTCTGGCAATAAAGATCAGAAAATTAATCCACCAGTAGTCGTGGATTCGAGTGTGTTTCCAACAGGGCCTCCAGTGCCAGTGCAAACACAAAAGCTCTTGAAATTTGTTGACATGTCACAGTTATGCAAAGGCCCACAAGATAGTCCTGGCCATTGGTTGGTCACTGGGGCAAGACTGGTCTTGGATAAGGGTAAGATATGTTTATGGGTCAAGTTCTCTTTGTTAAATACTGGTGCCTGA 1785 0.4538 MGEDIVERAFRSLGKGFDLTSDFKLKFCKGEERLVVLNETERREVRVPGFGATRDVSVDIKCDKGDRMRYQSDILTFTQMSELFNQRSSIPGKIPSGYFNTVFGFDEGSWAADAANTKHLGLYGYFITLFNVHIDRYPLLLSKQVLEAVPSSWDPPALARFIENFGTHILVGLSIGGKDLVLVKQDVSSNLGPSELKKHLDDLGDQLFTGTCNFLPKTKEQKYKVPQAFDVFGPQIVAFNSSTSVCAKDGITVICSKSGGDTQVSNHCEWLLTVPKKPDAVHFNFIPITSLLKNAPGRGFLSHAINLYLRYKPPMSDLAYFLDFQAHKLWAPVHNDLPLGPVTNRTTLSPFLSFNLMGPKLYVNTAKVTVGNKRPITGMRLFLEGMKCNRLAIHLQHLINTPIMFDGKIEDTTIWSEEVNDDRFFEAINGKKFSHVCTAPVKYNPRWSTGTDNDVAFIVTGAQLHVKKHDSRNVLHLRLLFSKVANSIVVKSKWTQGSSGLSQKYGIFSAISTSISGNKDQKINPPVVVDSSVFPTGPPVPVQTQKLLKFVDMSQLCKGPQDSPGHWLVTGARLVLDKGKICLWVKFSLLNTGA* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3118 594 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 322 IPR020864 -
Dod04g3118 594 PANTHER OS02G0736300 PROTEIN 3 592 - -
Dod04g3118 594 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 3 592 IPR044663 GO:0006952|GO:0012501|GO:2000031
Dod04g3118 594 Pfam MAC/Perforin domain 99 308 IPR020864 -
Dod04g3118 594 SMART MACPF_8 125 310 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3118 Dod-Chr4 54863329 54871492 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3118 04 54863329 54871492 Dod04g3118 04 54863329 54871492 ECH