Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3113 ATGGCGACGATGACGAGCTTGATCGGCCTCATAAATAAGATCCAACGAGCGTGCACGGTGTTGGGAGATCACGGTGGCGAGGGGCTGTCCCTCTGGGAGGCTCTTCCCTCCGTCGCCGTCGTCGGAGGACAGAGCTCAGGGAAATCCTCAGTGTTGGAGAGTGTGGTCGGAAGGGATTTTCTACCTCGTGGATCTGGTATTGTTACACGGAGGCCATTGGTATTGCAGCTTCATAAGACAGACGATGGGCAACAGGAATATGCTGAGTTTCTTCACTTACCACGAAAGAGATTCACTGACTTCGCTTCTGTAAGGAAGGAAATTGCAGATGAAACAGATCGTATAACTGGGAAGACAAAGCAAATTTCTAACATTCCAATTCACCTCAGCATTTATTCTCCGCATGTTGTAAACTTAACCCTTATAGATCTTCCTGGTTTGACAAAGGTTGCAGTAGAGGGACAACCCGAGAGTATAGTTCACGATATTGAAAACATGGTCCGCTCTTATGTCGAGAAGCCAAATTGCATTATCTTGGCTATCTCTCCCGCAAATCAAGATATTGCCACTTCAGATGCTATAAAAATTGCAAGAGAAGTTGATCCTTCAGGTGAACGAACATTTGGAGTGGTTACAAAACTTGATCTTATGGATAAAGGAACTAATGCTGTTGAAGTTCTCGAGGGAAGGCAATACAGGCTGCAGCATCCATGGGTTGGGATTGTGAACCGTTCGCAAGCTGATATTAATAGAAATGTTGACATGATTGTTGCTCGCAAAAAGGAGCGTGAATATTTTGAGACAAGTCCTGAATATGGACATTTGGCACATAAAATGGGCTCAGAATATCTTGCTAAGCTTCTATCTCAGCATTTGGAGCAAGTTATCAGACAGAAGATACCTAGTATCATCGCCTTAATAAATAAGACAATAGACGAACTTAATGCGGAGTTAGATCGTATTGGCAGACCAATCGCTGTGGACTCAGGGGCCCAACTATACACTATTTTGGAGATGTGTCGTGCATTTGACAAAGTATTTAAGGAACACCTGGATGGAGGACGTCCTGGTGGGGACCGAATTTATGGAGTTTTTGATAACCAATTACCAGCTGCTCTGAAAAAGCTACCCTTTGAACGCCATCTTGGCATGAAAAATGTCCAGAGAGTTGTCACTGAAGCTGATGGCTATCAGCCCCATCTGATTGCTCCAGAGCAGGGTTATAGAAGACTCATTGAAGGGTCTATTGGCTATTTCAAAGGCCCAGCTGAAGCTTCTGTGGATGCTGTACACTTTGTTTTGAAGGAACTTGTACGGAAGTCGATTGCAGAAACTGAGGAATTAAAAAGATTTCCAACACTTTCAAATGATATAGCAACTGCTGCAAATGAAGCTTTGGAAAGATTCCGAGAAGAAAGCAGGAAGACAACTCTACGATTGGTTGATATGGAGTCTAGCTATCTAACAGTAGAATTTTTCAGGAAGATTAATCTTGAACCAGAAAGGAATCCAAATGGGCCAAATCCAAATCGGAATGATAAGAACGATAAGAATCCTCCTCCCACTCCCAATATGGACAATTACTCTGACAATCACCTCCGGAAGATTGGATCAAATGTTAATTCCTATATCAACATGGTCTGTGATACGCTTAAGAATTCTATACCAAAGGCCGTGGTATATTGTCAAGTCAGAGAGGCTAAGAGATCTTTGCTTAACCACTTCTACGTTCAAGTTGGGAAGAAGGAGAAGGAGAAATTGGGCGCCATGTTGGATGAAGACCCAGCTCTTATGGAAAAGAGAAACCAAATTGCTAAAAGGCTTGAATTGTACAAGCAAGCTAGGGATGATATTGATTCCGTGGCTTGGAAATAA 1875 0.4299 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTDDGQQEYAEFLHLPRKRFTDFASVRKEIADETDRITGKTKQISNIPIHLSIYSPHVVNLTLIDLPGLTKVAVEGQPESIVHDIENMVRSYVEKPNCIILAISPANQDIATSDAIKIAREVDPSGERTFGVVTKLDLMDKGTNAVEVLEGRQYRLQHPWVGIVNRSQADINRNVDMIVARKKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLEQVIRQKIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHLDGGRPGGDRIYGVFDNQLPAALKKLPFERHLGMKNVQRVVTEADGYQPHLIAPEQGYRRLIEGSIGYFKGPAEASVDAVHFVLKELVRKSIAETEELKRFPTLSNDIATAANEALERFREESRKTTLRLVDMESSYLTVEFFRKINLEPERNPNGPNPNRNDKNDKNPPPTPNMDNYSDNHLRKIGSNVNSYINMVCDTLKNSIPKAVVYCQVREAKRSLLNHFYVQVGKKEKEKLGAMLDEDPALMEKRNQIAKRLELYKQARDDIDSVAWK* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3113 624 ProSiteProfiles GED domain profile. 533 624 IPR020850 -
Dod04g3113 624 Pfam Dynamin GTPase effector domain 529 621 IPR003130 GO:0003924|GO:0005525
Dod04g3113 624 MobiDBLite consensus disorder prediction 503 532 - -
Dod04g3113 624 Pfam Dynamin family 38 213 IPR045063 -
Dod04g3113 624 Gene3D Dynamin, middle domain 334 601 - -
Dod04g3113 624 PRINTS Dynamin signature 183 201 IPR022812 -
Dod04g3113 624 PRINTS Dynamin signature 202 218 IPR022812 -
Dod04g3113 624 PRINTS Dynamin signature 35 53 IPR022812 -
Dod04g3113 624 PRINTS Dynamin signature 60 77 IPR022812 -
Dod04g3113 624 PRINTS Dynamin signature 133 150 IPR022812 -
Dod04g3113 624 PRINTS Dynamin signature 225 244 IPR022812 -
Dod04g3113 624 Pfam Dynamin central region 222 489 IPR000375 -
Dod04g3113 624 Gene3D - 4 310 IPR027417 -
Dod04g3113 624 PANTHER BNAA09G45430D PROTEIN 4 624 - -
Dod04g3113 624 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Dod04g3113 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 309 IPR027417 -
Dod04g3113 624 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Dod04g3113 624 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Dod04g3113 624 SMART GED_2 528 621 IPR003130 GO:0003924|GO:0005525
Dod04g3113 624 MobiDBLite consensus disorder prediction 499 532 - -
Dod04g3113 624 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Dod04g3113 624 PANTHER DYNAMIN 4 624 IPR022812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3113 Dod-Chr4 54801008 54808681 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3113 04 54801008 54808681 Dod04g3113 04 54801008 54808681 ECH