Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3101 ATGAGACTGGGTTTGAAACTTCTGCAAGAAAGAGCTAAAGTTGGATCGTTTTGGTGGCCCTATATCAGCAATCTCCCCGAAACATACAGCATGCCTATCTTCTTTTCTGGGGAGGACATAAAGAACTTGCAGTATGCTCCTCTTCTTCACCAGGTAAACAAAAGATGTCGGTTTCTTCTTGATTTTGAGCAAGAAGTCAAGCGTGCCTTAGTCAACGTTACACCAGATAAGCATCCTTTTGGTGGCCAAGAAGTAGATGCATCTTCTCTTGGATGGGCGATGTCAGCAGTCTCATCTAGAGCATTCAGGTTATACGGTAACAAGCGTCCAGATGGGATCCACATTGACATACCCGTGATGCTCCCTCTAATTGATATGTGCAACCATAGTTTCAATCCAAATGCCAGAATTGTTCAGGAACAAGATACCAGTGACATGAAGATGCAAGTGAAGGTTGTGGCCGAGACAGCAATTAAAGATGATGATCCTTTATTACTTAACTATGGCTGTTTAAACAATGATTTTTTCCTTCTTGATTATGGATTTGTGGTGCATTCAAACCCTCATGACTGTATTGAACTCAAATATGATGGTGCTCTTCTGGATGCTGCAAGCATGGCTGCTGGAGTTTCTTCACCAAATTTCTCAGCACCTGCTCCATGGCAGGAGCTGATTTTATCTCAACTAAAACTTGCTGGAGAAGCTCCTGATCTCAAGGTAAGCATAGGCGGTCAAGATGTCGTAGAGGGCCGCTTGTTGGCTGCAATGAGAGTACTGCTTGCAAGTAATATGGAAACTGTGCAGAAGTATGACCTCAATGCACTCAAGTCTTTATCAGCTGAAGCTCCCCTTGGTGTTGCAAATGAAGTAGCTGTATTGCGTACTCTTATAGCTCTGTGTGTCATTGCACTTGGACACTTCCCCACCAAAATAATGGATGACGAATCATTGCTGAAGCAGGGTGCTTCAGGTTCAACTGAGTTGGCCATTCAGTACAGAATCCAAAAGAAATCTGTGATTATTGATGTAATGAGAGATCTGTCAAGGAGGGCAAAACTTCTCTCATCCAAGGAAACAGTGACTGCTGAAGGCTAA 1095 0.4329 MRLGLKLLQERAKVGSFWWPYISNLPETYSMPIFFSGEDIKNLQYAPLLHQVNKRCRFLLDFEQEVKRALVNVTPDKHPFGGQEVDASSLGWAMSAVSSRAFRLYGNKRPDGIHIDIPVMLPLIDMCNHSFNPNARIVQEQDTSDMKMQVKVVAETAIKDDDPLLLNYGCLNNDFFLLDYGFVVHSNPHDCIELKYDGALLDAASMAAGVSSPNFSAPAPWQELILSQLKLAGEAPDLKVSIGGQDVVEGRLLAAMRVLLASNMETVQKYDLNALKSLSAEAPLGVANEVAVLRTLIALCVIALGHFPTKIMDDESLLKQGASGSTELAIQYRIQKKSVIIDVMRDLSRRAKLLSSKETVTAEG* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3101 364 SUPERFAMILY SET domain 3 187 IPR046341 -
Dod04g3101 364 CDD SET_LSMT 1 183 - -
Dod04g3101 364 Gene3D - 218 360 IPR036464 -
Dod04g3101 364 PANTHER F21J9.27 1 361 - -
Dod04g3101 364 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 1 361 - -
Dod04g3101 364 Gene3D set domain protein methyltransferase, domain 1 1 182 - -
Dod04g3101 364 Pfam SET domain 20 169 IPR001214 GO:0005515
Dod04g3101 364 Pfam Rubisco LSMT substrate-binding 218 339 IPR015353 -
Dod04g3101 364 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 179 358 IPR036464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3101 Dod-Chr4 54717920 54721643 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod04g3101 SET 1e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3101 04 54717920 54721643 Dod04g3101 04 54717920 54721643 ECH