Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3095 ATGGGTTCCGAAGGATCCAGTGTTGTAGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGCGAGAAGGGAATTGGGGATGGAACTGTTAGCTATGGAATGGATGATGCTGATGATATATACATGCAGTCATGGACTGGGACTATTATTGGGCCCCCTGGTACTGTTCATGAAGGGCGTATCTACCAATTGAAATTGTTTTGTGGTAAGGATTACCCAGACAATCCACCATCTGTTAGATTTCAAACAAGGATTAACATGACTTGCATCAACCAAGAGACTGGAGTGGTTGAGCCAAATTTGTTTCCCATGCTTGCTAATTGGCAGAGAGAGTGTACAATGGAAGACATTTTGATGCAATTGAAGAAAGAAATGATGTCTCCACAAAACCGGAAGTTAGCTCAGCCTCCTGAAGGCAACGAAGAAGGCAGGATTGACCAAAAGGGGCTGGTGCTGAGATGTTGTATCGTGTAA 480 0.4354 MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCINQETGVVEPNLFPMLANWQRECTMEDILMQLKKEMMSPQNRKLAQPPEGNEEGRIDQKGLVLRCCIV* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3095 159 Pfam Ubiquitin-conjugating enzyme 41 136 IPR000608 -
Dod04g3095 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 8 145 - -
Dod04g3095 159 SUPERFAMILY UBC-like 9 142 IPR016135 -
Dod04g3095 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 8 145 - -
Dod04g3095 159 SMART ubc_7 14 158 - -
Dod04g3095 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
Dod04g3095 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3095 Dod-Chr4 54651514 54655264 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3095 04 54651514 54655264 Dod04g3095 04 54651514 54655264 ECH