Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1937 ATGATGACTCCAAACTTGAATTTGGAACCTGAAAACTATTCAGAAGGCATCAGCCAAGTAGCTTCCAATGTAGCCTTGCAAGAAGCATCCCTTGATCTTACCAAGGAAAGCACCACCACTTCTTCCTGTCTTACAAAGGCTGAAGGTGATCAAGGTTCCCTTACCCTTGACTTGACACTTAATTTCAATGCCAGTGATGGTGAGTTGAAGGGTACAAGTGATGCTAGCAGTGAAGTCGGAGCTGAAGCTCATGCCTCAGCAACTCCCCGAGTTTTCTCCTGTAACTACTGCAGGCGGAAGTTCTTTAGCTCACAGGCATTGGGGGGTCATCAGAATGCTCACAAAAGGGAGAGGACAATGGCAAAGCGTGCAATGCGAATGGGGATGTTCACTGAGAGGTATTCAAGCTTGGCATCTCTACCTCTTCATGGTTCACCTTTTCGGTCTCTAGGCATCGAAGCTCATGCTGCAATGCACCAAAGACACATGCCACAACTGAGGGCTCCTGATGTGAGGGCTGCTGCAAGATTTGAGAAAAACCATTTTGGATCACCAATTTTCATGGAAGATGATGATGTGGGTTTGTTTTGGCCTGGCAGTTTCAGACAGGTAGACCAGCGAGCTAGTGTCAATCTGGTACATGCGCAAACTCCCAATACTAGTTTTGTTCCGATGGCGCCACCTCCACCACAAGCGTCTCCATCTCCGGATCTCACTCTGAAGCTTTAA 729 0.476 MMTPNLNLEPENYSEGISQVASNVALQEASLDLTKESTTTSSCLTKAEGDQGSLTLDLTLNFNASDGELKGTSDASSEVGAEAHASATPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFTERYSSLASLPLHGSPFRSLGIEAHAAMHQRHMPQLRAPDVRAAARFEKNHFGSPIFMEDDDVGLFWPGSFRQVDQRASVNLVHAQTPNTSFVPMAPPPPQASPSPDLTLKL* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1937 242 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
Dod04g1937 242 SUPERFAMILY beta-beta-alpha zinc fingers 90 120 IPR036236 -
Dod04g1937 242 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 119 IPR013087 -
Dod04g1937 242 MobiDBLite consensus disorder prediction 219 242 - -
Dod04g1937 242 Gene3D Classic Zinc Finger 77 139 - -
Dod04g1937 242 PANTHER ZINC FINGER PROTEIN 3-RELATED 7 242 - -
Dod04g1937 242 PANTHER ZINC FINGER PROTEIN JAGGED 7 242 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1937 Dod-Chr4 42597485 42602643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1937 86 242 C2H2 Transcription Factor Family AT1G66140 46.277 5.57e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod04g1937 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1937 04 42597485 42602643 Dod04g1937 04 42597485 42602643 ECH