Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1932 ATGGGAGGTTCTTTTGATATGGGGTTGATGATTTTTTGGTGTCTGCTATTTGTTGTGGCTTCTGGGTCAAGCTTGCCCATCATATCCTTTGATGAAGGGTACACACCCTTGTTTGGGGACAATAACTTGGTCATCCATAGGGATGGAAAAACGGTTCATCTTTCACTAGATGAGAGAACAGGTTCAGGTTTTGTTTCTCATGATCTTTACCTTCACGGATACTTCAGTGCTTCCATTAAGTTGCCTGCTGATTACACTGCTGGAGTTGTGGTTGCCTTTTATATGTCAAATGGTGACATGTTTCAGAACAACCATGATGAAATCGACTTCGAGTTTTTGGGGAACATCAGAGGCAAAGACTGGAGGATTCAGACCAATGTTTATGGCAATGGAAGTACCAGCATTGGCAGGGAGGAAAGATATGGTCTCTGGTTTGATCCTGCCGAGGATTTCCATCAGTACAGTGTTCTCTGGACAGATTCTCAGATCATATTTTACGTTGATAATGTTCCTATTAGAGAAATTACGCGAACAGAATCTATGGGAGGAGACTTCCCCTCTAAGCCAATGACTTTGTATGCGACAATATGGGATGCTTCTGATTGGGCTACCAATGGAGGCAAATACAGAGTGAATTACAAGTATGCACCCTATGTTGCGGAGTTCTCTGACCTTGTCCTGCACGGTTGTGCGGTCGATCCCATCGATCATATAGCCACGTGTGACAATGCTCAAAGTTCCAAAGCAGTTCCTTCTGGGGTCACTCCGGCTCAAAGAATCAAAATGGAGAACGTCAGGAAGAAGCACATGACATACTCGTACTGTTATGACAGGGTCAGATACCAACTCCCTCCACCGGAGTGTGTGATCAATCCCCAAGAAGCTGAAAGGCTAAGAAAATTTGATCCCGTCACATTTGGCAATGGCCGGCGCCACCATGGAAAACGACACCATCACATCAGAGGAAGCCATGCTGATGCTGCTTCATTTTGA 993 0.4491 MGGSFDMGLMIFWCLLFVVASGSSLPIISFDEGYTPLFGDNNLVIHRDGKTVHLSLDERTGSGFVSHDLYLHGYFSASIKLPADYTAGVVVAFYMSNGDMFQNNHDEIDFEFLGNIRGKDWRIQTNVYGNGSTSIGREERYGLWFDPAEDFHQYSVLWTDSQIIFYVDNVPIREITRTESMGGDFPSKPMTLYATIWDASDWATNGGKYRVNYKYAPYVAEFSDLVLHGCAVDPIDHIATCDNAQSSKAVPSGVTPAQRIKMENVRKKHMTYSYCYDRVRYQLPPPECVINPQEAERLRKFDPVTFGNGRRHHGKRHHHIRGSHADAASF* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1932 330 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 10 309 IPR044791 GO:0004553
Dod04g1932 330 Pfam Glycosyl hydrolases family 16 33 214 IPR000757 GO:0004553|GO:0005975
Dod04g1932 330 MobiDBLite consensus disorder prediction 306 330 - -
Dod04g1932 330 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED 10 309 - -
Dod04g1932 330 Gene3D - 19 288 - -
Dod04g1932 330 CDD GH16_XET 28 288 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod04g1932 330 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 18 222 IPR000757 GO:0004553|GO:0005975
Dod04g1932 330 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 292 IPR013320 -
Dod04g1932 330 PIRSF EndGlu_transf 3 293 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod04g1932 330 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 252 288 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1932 Dod-Chr4 42541156 42544500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1932 5 324 Glycoside Hydrolase AT1G14720 66.358 2.31e-166 464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1932 04 42541156 42544500 Dod04g1932 04 42541156 42544500 ECH