Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1924 ATGTGGCCTACATTAGTGGCTAATAAGATACTCAAGAAGCGGCTGGGAAGCAGCAACTTCGTGGCAGATTATCCTAGTTATGAAGAGCCCTTGTTGGGCGTTGCAGCCATTGATCACAGCTCTACAACCGTTCTTAATGATCAAAAGGACATAAAAAAGTACAAGGTTTTTGTCAGCACATGGAACGTGGGTGGGATTGCACCGGACGAAGACTTGGACATAGAGGATTTGTTGGAGACATGCAACAACTCCTGTGATATCTATGTACTTGGGTTCCAAGAAATAGTGCCTCTAAAAGCATCAAATGTTTTGGGATCCGAAAATAGTGAGGTTTCAACGAAATGGAATTCCATAATCAGGGAAGCTCTGAACAAGAGAAGTACACATAATAAGCACAATAATATTTGTCCCGAAGAGAAGATAGAAAATCCAGCACAGCAGTGCATAGCCCCACAGGATTTCCAGTGTATCATTAGCAAACAAATGGTTGGCATATTCATATCCGTGTGGACAAGGAGCTATCTTCGTCCATTCATTCAGAATCCAAGTGTCTCATGTGTGGGCTGCGGCATCATGGGCTGCTTAGGAAACAAGGGTTCTGTGTCAGTGAGATTTCAGTTACATGAAACAGGCTTCTGCTTTGTGTGCAGCCATCTAGCTTCAGGTGGCCGAGAAGGGGATGAGAAGCATAGGAACTCTAATGTTGCCGAAATATTTACCAGGACAAGCTTTCCCAAAGGCCCTTTGCTTGATTTGCCTAGAAAGATTCTTGATCATGATCATGTAGTATTGCTTGGAGATCTAAATTATAGAATTTCTCTACCGAAAGAAACGACACGCTTGCTTGTTGAAAAAAGGAACTGGGATTCCTTGTTAGAAAATGATCAGCTAATGATGGAGCTAATGAGCGGACACAGATTAAGAGGGTGGCGTGAAGGGCCAATCAAATTTGCTCCAACCTACAAGTATTTCCCAAATTCAGACACGTACTATGAATGCTGTTATCACGGGAAAAAGGCAGAAAAGAAGCGAGCACCAGCATGGTGTGATCGAATAGTATGGTACGGAAATGGTTTAAAGCAACTTCAGTACAGTAGAAGTGAGTCAAAACTATCTGACCACAGGCCTGTCAAGGCAATGTTTACAGCAGAAGTCAGGGTTTCACCAGAGCCAAGAAAATTGCACAACTTGTTCCTATCAGAAAGATTTGAGCAAATTAAAACTCCTTTTGAAGTTTCCACCACTACTGATGAATTTATATGTAAAAAACATTTGAGTTTCCGGTTGTAA 1290 0.4202 MWPTLVANKILKKRLGSSNFVADYPSYEEPLLGVAAIDHSSTTVLNDQKDIKKYKVFVSTWNVGGIAPDEDLDIEDLLETCNNSCDIYVLGFQEIVPLKASNVLGSENSEVSTKWNSIIREALNKRSTHNKHNNICPEEKIENPAQQCIAPQDFQCIISKQMVGIFISVWTRSYLRPFIQNPSVSCVGCGIMGCLGNKGSVSVRFQLHETGFCFVCSHLASGGREGDEKHRNSNVAEIFTRTSFPKGPLLDLPRKILDHDHVVLLGDLNYRISLPKETTRLLVEKRNWDSLLENDQLMMELMSGHRLRGWREGPIKFAPTYKYFPNSDTYYECCYHGKKAEKKRAPAWCDRIVWYGNGLKQLQYSRSESKLSDHRPVKAMFTAEVRVSPEPRKLHNLFLSERFEQIKTPFEVSTTTDEFICKKHLSFRL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1924 429 SMART i5p_5 52 389 IPR000300 GO:0016791|GO:0046856
Dod04g1924 429 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 406 - -
Dod04g1924 429 Pfam Endonuclease/Exonuclease/phosphatase family 60 374 IPR005135 GO:0003824
Dod04g1924 429 Gene3D Endonuclease/exonuclease/phosphatase 36 408 IPR036691 -
Dod04g1924 429 SUPERFAMILY DNase I-like 50 387 IPR036691 -
Dod04g1924 429 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 406 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1924 Dod-Chr4 42432835 42435610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1924 51 393 Acyl Lipid Metabolism Gene Families AT1G65580 27.806 5.72e-35 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1924 04 42432835 42435610 Dod04g1924 04 42432835 42435610 ECH