LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g1914	ATGGCATTGCTGCTGCTTCAATCCCAATCCCAATCCCAATCCGCATTGGTCCTCCTCATAGTGGCTTTGCTTACTGTGTCCTCCTTGTTGGATCTGGGAATTGGGCATCAGGGTCACTCCCATTCTGGCGTCTGTACATCCACCCACCGCCATGACCATGACCATGACCACCATCACCATCACCATGACCATAACTGCGGAGATGGAGATGCCCATGTTCATCACGTGAAGGAGAAAACGGCTTCCGAGTTCAAGCTTCCCGAGGAGTTAGCCGAGGAGGAGGATATGAAACTATACGGTTTTGGGTTACCTCATGATCATCACCATCATCATCATCTTCATCATCATCACCATATTGGGTCTTCAGAACTATCCGGTTTAGGCCTTTGGTTGAATGCGTTGGGATGTTCATTTCTGGTGAGCATTGCTTCCCTTGTCTGCCTCATTGTCCTCCCTGTAATTTTTGTGCAAGGGAAGCCATCCAAGGCTGTTGTTGATTCATTGGCTTTATTTGGGGCAGGAGCTATGTTGGGGGATGCTTTTCTTCACCAGTTACCTCATGCTTTTGGTGGCGAACACTCCCATTCTCATGGTAATCATGCAGACCATGACCATGATGCTAGTTCTGGACATGGGCATTCACATTCTTTAGCCGATCTTTCTACAGGAATGTCCATCCTGGCTGGGATTGTACTCTTTCTTCTAGTGGAGAAAGTAGTGAGGTATGTTGAAGAAAACTCCGGAGGAGCTAGTTCATGGGCACATGGACACCACCACCATAACCACAAGAACAAGAAAAAATTGAAAGGTGATAACAACGTAAATGCAGAAGTGGAGAGATTGCTAGGTGACTCTTCAAAGAGAGATAATCCAGCTCAGTCTGAATCCCCAATTAGAAAGAGAAGTAGCAAAACGACCAAAGGTGGTAATCCCAATGCTAGTGCTGTAGATAGCTCCACAGACAACATCAAATCCTCGAATCTTAACGAACCAGTTGGATCGCCAGCAAGTCTTGTATTTGGTTATCTCAATCTTTTCTCTGATGGAGTTCATAATTTCACCGACGGAATGGCATTAGGAAGTGCATTCATGCTTTATGGATCTGTTGGTGGCTGGTCTAGAACTATGTTTTTGCTCGCACATGAGCTTCCTCAAGAGATTGGTGATTTTGGTATTTTGATAAGATCTGGTTTCAGCATACCAAAAGCTCTGTTCTTCAACTTTCTTTCAGCACTTGTGGCACTTGCAGGAACTGCATTGGCTCTGCTCTGGGGGAAAGATCCCGGACAGTCGTCTGTGATTGAGGGATTTACAGCAGGTGGATTTATATATATTGCAATAGCAGGGGTGCTTGCAGAAATGAATAACAGTGGTGGGAAGGCAACATTGAGAAGTACAGCTATCCAAATAATCTCGCTGACAATGGGCATGGCTGTTGCCCTAGCTATTTCCCTTGTAGAATGA	1464	0.4556	MALLLLQSQSQSQSALVLLIVALLTVSSLLDLGIGHQGHSHSGVCTSTHRHDHDHDHHHHHHDHNCGDGDAHVHHVKEKTASEFKLPEELAEEEDMKLYGFGLPHDHHHHHHLHHHHHIGSSELSGLGLWLNALGCSFLVSIASLVCLIVLPVIFVQGKPSKAVVDSLALFGAGAMLGDAFLHQLPHAFGGEHSHSHGNHADHDHDASSGHGHSHSLADLSTGMSILAGIVLFLLVEKVVRYVEENSGGASSWAHGHHHHNHKNKKKLKGDNNVNAEVERLLGDSSKRDNPAQSESPIRKRSSKTTKGGNPNASAVDSSTDNIKSSNLNEPVGSPASLVFGYLNLFSDGVHNFTDGMALGSAFMLYGSVGGWSRTMFLLAHELPQEIGDFGILIRSGFSIPKALFFNFLSALVALAGTALALLWGKDPGQSSVIEGFTAGGFIYIAIAGVLAEMNNSGGKATLRSTAIQIISLTMGMAVALAISLVE*	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod04g1914	487	MobiDBLite	consensus disorder prediction	192	215	-	-
	Dod04g1914	487	PANTHER	ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4	13	487	-	-
	Dod04g1914	487	MobiDBLite	consensus disorder prediction	41	72	-	-
	Dod04g1914	487	MobiDBLite	consensus disorder prediction	248	327	-	-
	Dod04g1914	487	MobiDBLite	consensus disorder prediction	193	212	-	-
	Dod04g1914	487	MobiDBLite	consensus disorder prediction	287	327	-	-
	Dod04g1914	487	Pfam	ZIP Zinc transporter	128	483	IPR003689	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod04g1914	39	435	Organic Solute Cotransporters	AT1G68100	60.644	5.47e-134	392

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod04g1914	04	42199588	42205517	Dod04g1914	04	42199588	42205517	ECH