Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1911 ATGGATGATGATATGTTGAACATGACCAATTGGGGTTATTATGAACCCTTCAAAGGGGGCCATCTTGGTCTGCAGCTCATGCCTGGTATGACAGATCGTGACACAACAAAGCCATTTCTGTCTGGTCGTGATCCAACCATGTTAGTTGGTGCAAATGGAACCTTTCACCCCCGGGATTGTGTTGTCTCTGAAGCACCAATGCCGATGAACTATGTGAGGGATAGTTGGATCAACCAGAGAGATAGGTATTTCAATATGCAGCCCACAAATCCTAACTATGCTGTTCTTCCGGAAACGTCGGCAGCTCCCTCAGCCTCTCAAATTGCACAGCCACCTGATACATCAAGGGATGAGAAGGCTGACATAATTGAAGAACCAGTTCAAAAGGCAGGGGGCCAATCAAAGAAAAGGCAAGGTAGGGGTGCTGCTGCAGGGATTCCAAAAGCTAAGAAACAAAGGAAGCCAAAGGATAATAGCAATGCTCCTCCTGTTCAACGATCGAAGCCTATGAAGACTATGGAGCTTGTTATAAATGGAATTGACATGGACATTTCTGGTTTACCCATTCCAGTTTGCTCATGTACTGGGACTGCTCAGCAGTGTTATCGATGGGGCTGTGGAGGTTGGCAATCTGCTTGTTGCACCACAAATGTGTCGATATATCCTTTGCCAATGAGCATGAAAAGGCGTGGTGCAAGGATAGCTGGACGAAAAATGAGCCAGGGTGCTTTTAAGAAGGTCTTAGAGAAACTAGCAGCTGAAGGTTATAATTTCGCTAACCCAATTGATCTGAGGACTCATTGGGCCAGACATGGCACCAACAAATTTGTCACTATCAGGTAG 843 0.4591 MDDDMLNMTNWGYYEPFKGGHLGLQLMPGMTDRDTTKPFLSGRDPTMLVGANGTFHPRDCVVSEAPMPMNYVRDSWINQRDRYFNMQPTNPNYAVLPETSAAPSASQIAQPPDTSRDEKADIIEEPVQKAGGQSKKRQGRGAAAGIPKAKKQRKPKDNSNAPPVQRSKPMKTMELVINGIDMDISGLPIPVCSCTGTAQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRTHWARHGTNKFVTIR* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1911 280 MobiDBLite consensus disorder prediction 88 171 - -
Dod04g1911 280 SMART GAGA_bind_2 1 280 IPR010409 -
Dod04g1911 280 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 280 - -
Dod04g1911 280 MobiDBLite consensus disorder prediction 88 113 - -
Dod04g1911 280 PANTHER - 1 280 IPR010409 -
Dod04g1911 280 Pfam GAGA binding protein-like family 1 280 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1911 Dod-Chr4 42183905 42186069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1911 1 280 BBR or BPC Transcription factor family AT2G01930 57.383 2.28e-105 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Dod04g1911 GAGA_bind 3.3e-101 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1911 04 42183905 42186069 Dod04g1911 04 42183905 42186069 ECH