Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0218 ATGGCACTCTCACTCTTCACCCTCATTGTCCTTTCTCTCTCTTCACTCTCTTTCTCTTCCTCATCTCCTTCTTCTTCTTCTCCAGCGGACACGTTCGTCTACGGAGGGTGCACGCAGCAGAGGTACGCACCAAACTCGCCCTACGAGTCGAACCTAAACTCGCTCCTCAACTCGCTCGCCAACTCAGCAACCTTCTCGTCCTACAACAACCTCACCGTCCTCGCCTCCTCCCAAAGCGACGTCGTATCCGGCCTCTACCAGTGCCGAGGCGACCTCGCCATGCCGGACTGCGCCGCATGCGTCCAACGCGCAATCTCACGCGCCGGCGAGCTCTGCTCGTCGGCATGCGGCGGCGCAGTCCAGCTTGATGGGTGCTTCATCAAGTACGACAACGCCACGTTCGTTGGCGTGGAGGACAAGGCGGTGGTGCTGAGGAAATGCGGGTCGGGGTCATCGGACGGGGTATTTTCGGGTTGGCGGGTCGGGTCGGGTGAGGGGAGTGGCCAGTGCACGGGGGACTTGAGCGTGGCGGAGTGTCAGGATTGCGTTGGGGAGGCGATCCGACGGCTGAGGAGCGACTGCGGCGGTGCGGATTACGGGGATGTGTTCTTGGGGAAGTGTTACGCGAGGTTCTCAGCGGGTGGGCCTCGCGGGTACTACGGCTCCAAGGCCCATGCAGGTAAATCGGACAATGAAGGTGAAAAGACATTTGCTATAATTATTGGACTATTAGCGGGTGTAGCTATACTTATTATTTTCCTTGCTTTCTTGAGGAGGATATGTGAAGGACAAGGTAAATAA 801 0.5768 MALSLFTLIVLSLSSLSFSSSSPSSSSPADTFVYGGCTQQRYAPNSPYESNLNSLLNSLANSATFSSYNNLTVLASSQSDVVSGLYQCRGDLAMPDCAACVQRAISRAGELCSSACGGAVQLDGCFIKYDNATFVGVEDKAVVLRKCGSGSSDGVFSGWRVGSGEGSGQCTGDLSVAECQDCVGEAIRRLRSDCGGADYGDVFLGKCYARFSAGGPRGYYGSKAHAGKSDNEGEKTFAIIIGLLAGVAILIIFLAFLRRICEGQGK* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0218 266 Pfam Salt stress response/antifungal 166 212 IPR002902 -
Dod04g0218 266 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Dod04g0218 266 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 162 262 - -
Dod04g0218 266 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 5 148 - -
Dod04g0218 266 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 162 262 - -
Dod04g0218 266 Gene3D - 29 134 IPR038408 -
Dod04g0218 266 Gene3D - 148 214 IPR038408 -
Dod04g0218 266 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Dod04g0218 266 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 5 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0218 Dod-Chr4 2696787 2698486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0218 20 212 Pollen Coat Proteome AT4G20670 23.913 2.38e-10 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0218 04 2696787 2698486 Dod04g0218 04 2696787 2698486 ECH
Dod04g0218 04 2696787 2698486 Dod08g0843 08 10131104 10139358 PCT