Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01187 ATGGAATCAGTGAAGCCCTCGGCTGTGACCCCACGAAAGAAGTTGGCTCGGAGTTTCGCCAAGGTTCTTCATGTGAAAGCATTGATTGGAATTGCCTCAGTTGATGGTTTGAAGAATGTTGTTATATCTGATGCAAATCTCAAGGATGAAGGGGGCATGGTGAATAATAAGACTGCACTGAATAATAATTGGTCAAGAGATGAAGATGAAGAGCTTCAAGAGAGAGTGGCCAACGAGGCTCTTTTAGCAAAGCTTTTTGCTAGCATTTCATCTGTTAAGGCTGCATATGCACAGCTTCAGTTTTCTCAGTCACCCTTTGACCCTGATGGAATTGAAGCTGCTGATCAATTGCTGGTGTCTGAGTTGAAGAACTTGTCTGAGCTAAAGCAATGTTACTTGAAGAAACAGTTTGATTCTTCTCCGGAGACGGAGATTCTCGCGGCTGAGTCGAAGGAGCTGCAGGGTGTGATCAAGACCTATGAGATCATGGGGAAGAAGTTGGAGTCACAGGTGAGGCTCAAGGATTCTGAGATCATATTTCTTAGGGAGAAGCTAGAGGAGGCTAATAAGCAGAACAAGGCAATTGAGAAGAGGTTGAATCAAAGTGGGCAATTATCTTCTGTGCTTGATAATCTTCACATATCAGGACTAAATCCTAGCCATTTTGTAACCGTTCTTCGCCACGCGGTTAGGTCAATTCGGAACTTTGTGAGGTTGATTGTGGATGAGATGAGATCTTCTGGTTGGGATGTTGATGCTGCAGTTGATGCCATTGAGCAGAATGTGGCTTATTTGGTGGAAGATCACAAGTGTTTTGCAATTGAGGCCTTTGTTTGTAGAGAAATGTTTGATGCTTTTCACTTCCCAAATTTCTCCCTTGCAAATGAGTCTCTCCCTGATAGAAGCAGGATGCCACAGTGGTTCTTTGGGAAGTTCAATGAGGTGAAATCAATGAAAGCCAAGGACTTCCTTGCTGAGAGGCCAAGATCATCATTTGCAAAGTTTTGCAGGGTCAAGTATTTGAGGCTTGTTCACCCCAAGATGGAGTCATCATTTTTTGGCAACATGAGTCATAGGAACATTGTGAATGCTGGAGGGTTTCCAGACACTGCATTCTTCACATCATTTGCTGAGATGGCCAAGAGGGTATGGCTCCTGCACTGCTTGGCCTTCTCATTTGAGCCTCAGGTCTCAATCTTTCAAGTGGGGAGAGGGTGTAGATTCTCTGATGTGTACATGGAAAGTGTGAATGATGAAATGTTCCTCTATTCAGTGGAATCAGATCCACATGTTGCTTTCACTGTGGTTCCAGGGTTTAGGATTGGTAAAACTGTTCTACAGTGTCAAGTGTATCTCTCACAGCACCAAAGCAAGGTTAAAAAATTCACTTCAACAAAGCAAAGGTAG 1407 0.4364 MESVKPSAVTPRKKLARSFAKVLHVKALIGIASVDGLKNVVISDANLKDEGGMVNNKTALNNNWSRDEDEELQERVANEALLAKLFASISSVKAAYAQLQFSQSPFDPDGIEAADQLLVSELKNLSELKQCYLKKQFDSSPETEILAAESKELQGVIKTYEIMGKKLESQVRLKDSEIIFLREKLEEANKQNKAIEKRLNQSGQLSSVLDNLHISGLNPSHFVTVLRHAVRSIRNFVRLIVDEMRSSGWDVDAAVDAIEQNVAYLVEDHKCFAIEAFVCREMFDAFHFPNFSLANESLPDRSRMPQWFFGKFNEVKSMKAKDFLAERPRSSFAKFCRVKYLRLVHPKMESSFFGNMSHRNIVNAGGFPDTAFFTSFAEMAKRVWLLHCLAFSFEPQVSIFQVGRGCRFSDVYMESVNDEMFLYSVESDPHVAFTVVPGFRIGKTVLQCQVYLSQHQSKVKKFTSTKQR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01187 468 Pfam Plant protein of unknown function (DUF641) 75 198 IPR006943 -
Cca10g01187 468 PANTHER OS01G0203800 PROTEIN 1 452 - -
Cca10g01187 468 Coils Coil 171 205 - -
Cca10g01187 468 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 1 452 IPR040225 GO:0009639|GO:0009959
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01187 Cca-Chr10 15250188 15255796 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01187 10 15250188 15255796 Cca04g01525 04 21791086 21795693 ECH
Cca10g01187 10 15250188 15255796 Cca10g01187 10 15250188 15255796 ECH