Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02772 ATGTCTCTTCCACCCATAGAGTGTGTATACGTTACAGAGGACTATGTTCGCGAATGGAGGAGTGGCAACCCTGCCCTCAAGGTTTCCGAGCCTGTCCCAATGCTTCGCTTCCTCTACGAGCTCTGCTGGACTATGGTTCGGGGTGAATTGCCGTTTCAGAAGTGTAAAGTAGCGTTAGATTCTGTCATATTTTCAGATAAAGCTTCGACTGAGAAAATAGCTTCAAATTTTGCTGATATAGTCACCCAGATGGCTCAAGATCATACAATGTCAGGAGAATTCCGTTCTCGTCTTGTCAAACTGGCAAGATGGCTTGTGGAATCTGAAATGGTTCCAGTTAGGCTACTTCAAGAACGTTGTGAGGAAGAATTTTTGGGGGAGGCTGAGTTGATCAAAATTAAGGCTCAAGAGTTGAAGGGTAAAGAGGTCCGAGTTAATACCCGACTCCTATATCAACAAACCAAATTCAACCTTCTCAGAGAAGAGAGTGAGGGCTATGCAAAGCTGGTTACTCTTCTTTGTCGGGACTCTGAAGCACCTACTCAAAAAGCATCTGCTGCAACAATTGGCATTATTAAGTCATTAATCGGCCATTTTGATTTGGACCCAAATCGCGTTTTTGATATTGTTCTTGAGTGTTTTGAACTGCAGCCTGATGATGGCGTGTTTGTTGAGTTGATTCCTATTTTTCCAAAGTCTCATGCTTCACAGATTCTTGGATTTAAATTTCAATATTATCAGCGCATGGAAGTCAACAGTCCTGTTCCATTTGGGCTCTATAGACTTACAGCCCTGCTGGTGAAGCAAGATTTTATTGATCTTGATAGCATATATACTCATCTACTTCCCAAGGATGATGAGGCATTTGAGCATTACAATACATTCTCTTCCAAGCGCCTTGACGAGGCTAATAAAATTGGAAGAATAAACCTTGCTGCAACCGGAAAAGATCTAATGGATGATGAGAAACAGGGGGATGTCAATATAGATCTCTTTGCTGCTTTAGACATGGAAACAGATGCAATTGAAGAGCGAACAACTGAACTTCAAAACAGTCAGACTTTGGGCCTACTTACTGGCTTTCTTTCAGTAGATGACTGGTATCATGCACGTCTTCTATTTGAACGCCTTTCACCGCTCAATGCAGTGGAACATATTCAAATTTGTGACAGTTTGTTTAGGCTTATCGAGAAGTCAATGTCTTCAGCATATGATGTTATTCGCCAGACACATCTTCAAAATCCTGGATCGTCCACAGGTGGTAGCACTGATGTTATGGATGTAGACAACTCTTCAGGACACGATTCTTTCATAGACCTTCCAAAGGACCTTTTTCAGATGCTTGCTTGTACTGGACCTTATCTCTACCGTGATACTGTACTGTTGCAGAAGGTTTGTAGGGTGTTGAGAGGTTATTACCTTTCTGCTCTTGAGCTTGTAAGTCATGGTGAAGGTGCCTTGGATACTCAATTACATTTTTCTGGAAATCCTCACCTACATCTTAAGGAGGCAAGGCTAAGGGTGGAGGATGCTTTAGGAACATGTCTACTGCCTTCTCTGCAGTTAATTCCTGCAAATCCAGCTGTTGGCCAGGGAATTTGGGAACTAATGAGTCTCCTCCCTTATGAGGTGCGATATCGTTTGTATGGTGAATGGGAAAAAGATGATGAACGCGTTCCTATGCTCTTAGCTGCAAGACAAACGGCCAAGTTGGACACCAGACGTATTTTAAAACGGTTGGCAAAGGAAAATTTGAAGCAGCTGGGTCGGATGGTTGCAAAACTAGCTCATGCCAATCCTATGACTGTCCTTCGAACAATTGTTTATCAGATTGAGGCTTACAGAGACATGATTACTCCTGTAGTGGATGCATTTAAGTACTTAACTCAGCTTGAGTATGATATATTAGAATATGTCGTGATTGAGCGCTTGGCACTTGGAGGACGTGACAAGTTAAAGGATGATGGCCTCAATTTGTCGGACTGGCTTCAATCTCTAGCTTCATTTTGGGGTCACCTGTGTAAGAAGTACCCATCAATGGAATTAAGGGGCCTCTTCCAGTATCTCGTTAACCAGTTAAAAAAGGGGCAGGGAATTGAGCTTGTTCTACTGCAGGAGCTTATTCAACAAATGGCAAATGTCCAGTACACTGAGAACTTGACTGAGGAACAGCTGGATTCAATGGCAGGGAGTGAGACTCTCAGATATCAAGCAACATCTTTTGGTGTTACTCGGAATAATAAGGCATTGATAAAGTCAACTAGCAGACTTAGAGATGCATTACTTCCAAAAGATGAACCAAAGTTGGCGATACCCCTGTTACTCCTTATTGCTCAACATCGTTCTCTGGTTGTCATCAATGCAGATGCCCCCTACATTAAAATGCTTAGTGAGCAGTTTGATAGATGTCATGGAACTCTCCTTCAATACGTGGAATTTCTTTGCAGTGCAGTCACACCAGCATCAAATTATGCCATTCTTATTCCCTCCCTCAATGACCTGGTCCACCTTTACCACCTGGACCCTGAGGTTGCGTTCTTGATATACCGCCCTGTAATGAGGCTTTTCAAGTCTCAGAGGTATCCTGATGTTTGCTGGCCCTTGGATGATAAAAATACTGCAAGTGATGCATCTATGAATTTGGAGTCTGATCCTTCGGATCATTCTTCTAGTATGGTTCTAAATCTTGGCTCTGCTCAAAGTCCTATCAGTTGGTCATATCTTCTTGATACTGTCAAAACGATGTTACCTTCAAAAGCATGGAATAGTCTATCTCCTGATCTCTATGCGACATTTTGGGGTCTTACATTATATGATCTGTATGTTCCAAAAAATCGTTATGAGTCAGAAATAGCCAAGCTGCATGCTAATCTTAAATCTTTGGAGGAGCTTTCTGACAATTCAAGCTCAGCAATCACAAAGAGGAAGAAAGAAAAGGAAAGAATTCAAGAATCTCTTGATCGTCTGATTAGTGAACTGCATAAACATGAAGAGAATGTTGCATCTGTTCATAGACGGCTTTCTCATGAAAAAGACAACTGGTTAAGTTCCTGTCCTGACACCTTGAAGATCAACATGGAGTTTCTTCAGCGTTGTATATTTCCACGCTGTACTTTCAGTATGCCCGACGCTGTTTATTGTGCTATGTTTGTACACACACTTCATTCCCTAGGAACCCCCTTTTTTAACACAGTCAACCACATAGATGTTCTGATTTGTAAGACCCTTCAACCAATGATATGCTGCTGCACTGAATATGAGGCTGGCAGGCTTGGCAGGTTTCTGTATGAGACTTTGAAGATTGCTTACCATTGGAAGAGTGATGAATCTATTTATGAACGTGAGTGTGGCAACATGCCAGGCTTTGCCGTTTATTATAGATATCCAAATAGCCAGCGAGTTACCTATGGGCAATTCATTAAGGTACACTGGAAGTGGAGTCAAAGAATCACACGGTTATTAATTCAGTGTCTGGAATCTAGTGAGTACATGGAAATAAGAAATGCTCTTATAATGTTGACAAAAATTTCTAGTGTTTTCCCTGTTACTCGGAAGAGTGGGATAAACCTTGAAAAACGGGTAGCTAAGATTAAAAGTGATGAAAGAGAGGATCTTAAGGTGTTGGCAACTGGTGTCGCTGCAGCTTTGGCTGCTAGGAAGCCTTCTTGGGTTACTGATGAAGAATTTGGTATGGGTTATCTTGAGTTAAAACCTGCACCATCTGTGACTAAAACTTCTGCTGGGAATTCAGCAACCGTACAAAGTGGGATAAATCTCAATGTTTCACAGACTGAACCTGCCGGTGGAAAGCATGCAGACTCTGGAAACCCAGCTAAAGATCAGGTAATAAGAACAAAAAATGCTGATGGCAAGTCAGACAGAACCGAAAGCATTACAGCAACAAAATCTGATTCTGGCCACACAAAACTCAAGGGTGGTTCAATGGTTAATGGATTGGATGCTCCATCATCCTTGCCTCCTTCTGTACAACCTGGGACGTCAAAATCTATGGAAAACACAAAGCAAGTGGAAGAATCCATAAATAGAGCATCAGATGAACATGGGACAAGAATTGCTGAGTCGAGAACTTCAGCAAAACGTTCAGTGCCTGCTGGTTCACTTTCAAAGTCCTCAAAACTAGATCCCATAAAAGAGGATGGTAGATCTGGAAAACCTGTTGCTAGATCTTCTGGTTCCTCAAGCAGCGACAAGGATCTACAAACCCATGCGTCAGAGGGAAGACACACTGTAACTACTAATGTATCTTCTTCAGTCAGTGCTAATGGTAACACCATTTCAGGTTCTACAAAAGGTTCAAATCCACCAGCAAAGATTTCATTGGATGGTCCTGGTAATGAACCAAAGGCAGAGGTTGGAGTTACCAAGTCTTCTGATATTAGGGCTTCTATGGTGAAGGATGATGGAAATGATATTGCTGACTTCACAAGAGGATCCTCTTCTCGGGTAGTTCATTCCCCTAGGCATGAAAATACAGGTGTTACTTCAAAGTCTAATGATAAAATTCAGAAGAGAGCTGGTTCTGCTGAAGAACCAGACAGACTAGGTAAACGACGGAAAGGGGATGTGGAGCTAAGAGATTTTGAAAGTGAAGTTCGATTCTCTGAAAGAGATAAGCCCATGGATCCTCGATTTGCTGATGACAAATCAGGACCAGATGAGCATGGTCTGCACAGGGCAGGTGACAAGCCATTGGAAAGGCCAAAAGACAAAGGCAACGAAAGATATGAAAGGGAACACAGGGAAAGATTGGACCGCCTGGATAAGTCTCGTGGTGATGACTTTGTTGCAGAAAAACCTAGGGATAGGTCAATTGAAAGATATGGAAGAGAACGATCTGTTGAGAGAATGCAAGAAAGGGGTAATGAGAGGAGTTTTAATAGACTCCCTGAGAAAGCTAAGGATGAAAGAAGCAAGGATGATAGAAATAAATTACGATACAATGATGTATCAGTAGAAAAATCTCATGCTGATGATCGCTTCCATGGACAAAGCTTGCCTCCACCACCCCCTTTACCTCCTAATATGGTTCCTCAATCTGTGGGAGCTGGTAGGCGTGATGAAGATGCTGATAGGAGGTATGGAGCTACAAGGCACTCTCAAAGACTTTCTCCAAGGCATGAAGAAAAAGAAAGGAGACGGTCTGAAGAGACTGTGGTTTCTCAGGATGAAGCCAAGCGCCGAAAAGAAGATGATTTTCGAGATCGAAAACGTGAGGAAATTAAGGTGGAAGAGAGGGAGAGGGAAAGGGAGAAATCAAACATTCTAAAGGAAGACTTGGATTTAAATGCCGCTTCCAAGAGACGCAAACTTAAAAGGGAGCATCTACCAACCAGTGAACCCGGCGAGTACTCACCAGTGGCCCCTCCACCTCCTCCCCCTGGTATTGGTATGTCTGTAGGGTATGATGGAAGGGATAGAGGAGACAGAAAAGGACCAATCATCCAGCATCCAAGTTACATAGATGAACCAAGTCTCAGGATTCACGGTAAAGAGGTGGCCAGCAAGTTGAATCGTCGTGATTCTGATCCCTTGTATGACCGCGAATGGGATGATGAGAAGAGGCAAAGAGCTGATCAAAAGCGAAGGCACCGAAAGTAA 5619 0.4268 MSLPPIECVYVTEDYVREWRSGNPALKVSEPVPMLRFLYELCWTMVRGELPFQKCKVALDSVIFSDKASTEKIASNFADIVTQMAQDHTMSGEFRSRLVKLARWLVESEMVPVRLLQERCEEEFLGEAELIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAPTQKASAATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDDGVFVELIPIFPKSHASQILGFKFQYYQRMEVNSPVPFGLYRLTALLVKQDFIDLDSIYTHLLPKDDEAFEHYNTFSSKRLDEANKIGRINLAATGKDLMDDEKQGDVNIDLFAALDMETDAIEERTTELQNSQTLGLLTGFLSVDDWYHARLLFERLSPLNAVEHIQICDSLFRLIEKSMSSAYDVIRQTHLQNPGSSTGGSTDVMDVDNSSGHDSFIDLPKDLFQMLACTGPYLYRDTVLLQKVCRVLRGYYLSALELVSHGEGALDTQLHFSGNPHLHLKEARLRVEDALGTCLLPSLQLIPANPAVGQGIWELMSLLPYEVRYRLYGEWEKDDERVPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVYQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLTEEQLDSMAGSETLRYQATSFGVTRNNKALIKSTSRLRDALLPKDEPKLAIPLLLLIAQHRSLVVINADAPYIKMLSEQFDRCHGTLLQYVEFLCSAVTPASNYAILIPSLNDLVHLYHLDPEVAFLIYRPVMRLFKSQRYPDVCWPLDDKNTASDASMNLESDPSDHSSSMVLNLGSAQSPISWSYLLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIAKLHANLKSLEELSDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVHRRLSHEKDNWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEAGRLGRFLYETLKIAYHWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPSVTKTSAGNSATVQSGINLNVSQTEPAGGKHADSGNPAKDQVIRTKNADGKSDRTESITATKSDSGHTKLKGGSMVNGLDAPSSLPPSVQPGTSKSMENTKQVEESINRASDEHGTRIAESRTSAKRSVPAGSLSKSSKLDPIKEDGRSGKPVARSSGSSSSDKDLQTHASEGRHTVTTNVSSSVSANGNTISGSTKGSNPPAKISLDGPGNEPKAEVGVTKSSDIRASMVKDDGNDIADFTRGSSSRVVHSPRHENTGVTSKSNDKIQKRAGSAEEPDRLGKRRKGDVELRDFESEVRFSERDKPMDPRFADDKSGPDEHGLHRAGDKPLERPKDKGNERYEREHRERLDRLDKSRGDDFVAEKPRDRSIERYGRERSVERMQERGNERSFNRLPEKAKDERSKDDRNKLRYNDVSVEKSHADDRFHGQSLPPPPPLPPNMVPQSVGAGRRDEDADRRYGATRHSQRLSPRHEEKERRRSEETVVSQDEAKRRKEDDFRDRKREEIKVEEREREREKSNILKEDLDLNAASKRRKLKREHLPTSEPGEYSPVAPPPPPPGIGMSVGYDGRDRGDRKGPIIQHPSYIDEPSLRIHGKEVASKLNRRDSDPLYDREWDDEKRQRADQKRRHRK 1872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02772 1872 MobiDBLite consensus disorder prediction 1393 1442 - -
Cca09g02772 1872 MobiDBLite consensus disorder prediction 1261 1872 - -
Cca09g02772 1872 Coils Coil 972 1006 - -
Cca09g02772 1872 MobiDBLite consensus disorder prediction 1830 1864 - -
Cca09g02772 1872 MobiDBLite consensus disorder prediction 1480 1508 - -
Cca09g02772 1872 MobiDBLite consensus disorder prediction 1690 1785 - -
Cca09g02772 1872 MobiDBLite consensus disorder prediction 1284 1300 - -
Cca09g02772 1872 PANTHER THO2 PROTEIN 11 1779 IPR040007 GO:0000347|GO:0006397|GO:0006406
Cca09g02772 1872 Coils Coil 1740 1760 - -
Cca09g02772 1872 MobiDBLite consensus disorder prediction 1345 1361 - -
Cca09g02772 1872 Coils Coil 944 964 - -
Cca09g02772 1872 Pfam Transcription factor/nuclear export subunit protein 2 921 1215 IPR021418 -
Cca09g02772 1872 MobiDBLite consensus disorder prediction 1509 1667 - -
Cca09g02772 1872 MobiDBLite consensus disorder prediction 1321 1344 - -
Cca09g02772 1872 PANTHER THO COMPLEX SUBUNIT 2 11 1779 - -
Cca09g02772 1872 MobiDBLite consensus disorder prediction 1789 1803 - -
Cca09g02772 1872 Pfam Transcription- and export-related complex subunit 592 667 IPR021726 -
Cca09g02772 1872 Pfam THO complex subunit 2 N-terminus 37 415 IPR032302 -
Cca09g02772 1872 Pfam THO complex subunit 2 N-terminus 442 590 IPR032302 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02772 09 53335060 53358387 Cca09g02772 09 53335060 53358387 ECH