Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02769 ATGGGGGGGCAGAATCTTTCACCAAAAGAAAGGAGTAGAGATTGGATTGGAGTTCTTATGAACAGCAGCTTTGGTTATTGTGATTATCACCATGACCTTCGATCTAATGAGAAAAATGTATTCTGTGTAGACTGTGCACTTAGGATGTGTAGGCACTGTAAGGAAGCTCATTCCCTCCATAGAAGGTTTCAGATTTACAAGTATTCCTATCAGGATGTCTTTCGCCATGCCGAGCTGCAGAAGTATTTTGATTGCTCAAAAATTCAGACTTACATATCTAATAATGAAAGGATTGTGCATCTCAAACCCCGGCCTTCAATTGTCAAACCTAAATCTGCTGATCTTAGCCCCGAGTCTAAATCTAAAGAAACCAGCATATCAACAAGACAAAAGTCGGGTGGCACGTGTGAAGAATGTGGAAAGCACTTACAAGATGAGCGTAATCGCTTCTGCTCCATTACATGCAAGATCTCAGTGCTTCCAGCGGAGACCCAAAACCAAGGTCAAAATCAATGTTCACAAAACCAAAGTGCTAGAAGCATCATCACTGCAAAACCTGAAGGCATTGACTTTACAATGAACGATTACCATAATTCAGAACCTGAGTCATCTATCTCTGAAGCTGAGCCATATGGGTGGGTTGAAGTTGTGAATTTCAGAAAACGTCCAAGGAAAAGCACCCCTCAGAGGCCTGTCTTTGTCTTCACGTCTTAG 714 0.4202 MGGQNLSPKERSRDWIGVLMNSSFGYCDYHHDLRSNEKNVFCVDCALRMCRHCKEAHSLHRRFQIYKYSYQDVFRHAELQKYFDCSKIQTYISNNERIVHLKPRPSIVKPKSADLSPESKSKETSISTRQKSGGTCEECGKHLQDERNRFCSITCKISVLPAETQNQGQNQCSQNQSARSIITAKPEGIDFTMNDYHNSEPESSISEAEPYGWVEVVNFRKRPRKSTPQRPVFVFTS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02769 237 MobiDBLite consensus disorder prediction 103 138 - -
Cca09g02769 237 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 230 - -
Cca09g02769 237 Pfam PLATZ transcription factor 67 157 IPR006734 -
Cca09g02769 237 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Cca09g02769 237 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 230 - -
Cca09g02769 237 SMART bboxneu5 22 65 IPR000315 GO:0008270
Cca09g02769 237 MobiDBLite consensus disorder prediction 119 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02769 Cca-Chr9 53314553 53316773 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Cca09g02769 PLATZ 2.2e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02769 09 53314553 53316773 Cca09g02769 09 53314553 53316773 ECH