Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02767 atGGGCGTGTCTTCAAACGAATCCATAGAATTGTGCATTTTCGATCTGAGGAGAGGCCAACACGAAGGTCAAGAGCTCGACAAGATCCTCTTTTTCTTCCCCGCCGGTTTGCCCTTCTCCAAGCAACTTTCCGTCATCGGCCTCAGCGAAGGCCTCATCACTTTCACTAGAATCTTCTCTCCAGAGGCCGCTTGCGAGCTCATCGAAGCCCAAAGTCATTCTCATGTCTTTCACGAGCCCGAACCCGATATCTGGATCGTCATGGTCGTCGACAAAAGCAATGATTCTGAACCTATATGGAGAGATGATGCATTAAGAAAAGTTCTCAAGGAAATTCACTCGCTTTTTGTCATGTTTCATGGATCTATTAGAGCAATGTTGGAGAAAGAGCCTGGTGGAGAACTAACAAGACGTCATTTATATTCCTTTATCATGGATTATCTGAGGGCATGTAAAAAGCGGTCTCCGTGGGATAATTGCTGCTGTGATTTTCTTGTGGGGAAAAAGCTCCTTTTACCGTCATTCCGTGATTGCTTAAAGGAGCGTGGAACTGTGCAGATGCTGACGATAGGTCGGGAGGCTGCAATTGAGGTTCAGTCCCTTGTCAGGGTGCTTGAATCTTCTGCTGGAAACACTCCCTGCTACTCTTTGATTTTATTTCAAGACCTGCTAGTGTCCACAACTCTATCTCCCGATGACACCATAAATTTATTTACATATGCTGTGCTAAGGTTGACTCCACATGCTCTATCTTCTGGAACAAGTTCCTGGTCCTACTTACGGAAAGGAAGTACTGCATCCAACATTGCTGCCGAGTCTAATGTGGCCCATCCAAGCTCTATGTCTGAAAGTTTTTATGGCACATCTGATATATCCTCTGGTGAAGATAACCACTATCATGTTGTGAGGCCCTTGCAGAGAGACAAATGGTCTAAAGGAAAAGATGGTTATCTTTTCACTGATTCATGGGGCGCAGAAGTTGGTACATGGGTGTTTGCCACTCCTACTGTTTGGCTTCAACAGACAGGAGAGAAAATGTATCTCTGTGTTTATCAGCATAGAAACCTCACTTTGATGCTTCTGATTCCTGTATCATCCATACCTAATGGGGAGCAAGGTGTGTCGGCAATGAAGCAGCAAGTTCTTGAAAATGCATCTCTTAAGATATTGAAAGTTGAAGAGAAACTTTCCAAAGGATGGGGTGGTGAGAATGCATATCACGTTAGTGGGTACCGCTACTTATTAATAGATGGTGATAGAAATGTATCCAGGGCTTCTCCAGCAACAAAAGTTACAACTTTAACAAAGGATTCCTTACTTGCCATGAATAAGCTTAGGCAAGAGGTGGAATTGGAGAAGAGTAGAGCAAAACTGGATAGCTTAAATTGTGAAAAAGATTTAGAGATGTGCATTAGAGCAAAAAATAATGCATGGGTTATTTCTCGTGTCACAAGGGGGAAGGAGCTTTATATGGTTTTAGAGAAAGCCAATGAAACCCTTCTATATGCCTCAGATGCTGTTGAGAAGTTCAGCGACAGGTATTGCGATGGAACATTTTCACTGGACTAA 1569 0.4334 MGVSSNESIELCIFDLRRGQHEGQELDKILFFFPAGLPFSKQLSVIGLSEGLITFTRIFSPEAACELIEAQSHSHVFHEPEPDIWIVMVVDKSNDSEPIWRDDALRKVLKEIHSLFVMFHGSIRAMLEKEPGGELTRRHLYSFIMDYLRACKKRSPWDNCCCDFLVGKKLLLPSFRDCLKERGTVQMLTIGREAAIEVQSLVRVLESSAGNTPCYSLILFQDLLVSTTLSPDDTINLFTYAVLRLTPHALSSGTSSWSYLRKGSTASNIAAESNVAHPSSMSESFYGTSDISSGEDNHYHVVRPLQRDKWSKGKDGYLFTDSWGAEVGTWVFATPTVWLQQTGEKMYLCVYQHRNLTLMLLIPVSSIPNGEQGVSAMKQQVLENASLKILKVEEKLSKGWGGENAYHVSGYRYLLIDGDRNVSRASPATKVTTLTKDSLLAMNKLRQEVELEKSRAKLDSLNCEKDLEMCIRAKNNAWVISRVTRGKELYMVLEKANETLLYASDAVEKFSDRYCDGTFSLD 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02767 522 Coils Coil 444 464 - -
Cca09g02767 522 PANTHER VACUOLAR FUSION PROTEIN CCZ1 HOMOLOG B 4 522 - -
Cca09g02767 522 Pfam First Longin domain of INTU, CCZ1 and HPS4 12 121 IPR043987 GO:0016192
Cca09g02767 522 PANTHER UNCHARACTERIZED 4 522 IPR013176 GO:0016192|GO:0035658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02767 09 53300409 53305523 Cca09g02767 09 53300409 53305523 ECH