Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02766 ATGAGCCGCCCAATGGAGGAAGATACTGTGGGTAAGAACGAGGAAGAAGAATTTAACACCGGACCACTATCAGTTCTAATGATGAGTGTTAAAAATAACACTCAGGTACTGATAAATTGTAGAAATAACAAAAAGCTTCTGGGTCGTGTTAGGGCATTTGATAGGCACTGCAATATGGTGCTTGAAAATGTTCGGGAGATGTGGACTGAGGTCCCGAAGACCGGTAAAGGGAAGAAAAAGGCCCAGCCTGTTAACAAAGATAGATTTATTAGCAAAATGTTCTTACGCGGAGATTCTGTCATCATTGTTCTTAGAAATCCAAAATAA 327 0.4037 MSRPMEEDTVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02766 108 Gene3D - 16 108 - -
Cca09g02766 108 Pfam LSM domain 29 103 IPR001163 -
Cca09g02766 108 CDD Sm_D2 18 107 IPR027248 GO:0008380|GO:0030532
Cca09g02766 108 SMART Sm3 26 105 IPR001163 -
Cca09g02766 108 SUPERFAMILY Sm-like ribonucleoproteins 21 106 IPR010920 -
Cca09g02766 108 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 1 108 IPR027248 GO:0008380|GO:0030532
Cca09g02766 108 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02766 Cca-Chr9 53293846 53296483 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02766 09 53293846 53296483 Cca09g02766 09 53293846 53296483 ECH