Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02748 ATGGCGGAGGTTTCCGGCGACGGCGGAGCGGAGGCGACGCTCGCCACTCCGGTGCCGCCGCTGGCGGTGTCCGGATCCTTCAAGGAAGGGAAGACCTCGTCGCGGAGGCGCGGACATTCGATGAGGCCGAGCCTCGACGCGGACGAGTTCATGAACCTGTTGCACGGTTCGGATCCGGTGAAGGTGGAGCTCAATCGGTTGGAGAATGAAGTTAGAGATAAGGACAGAGAATTATCGGAAGCGCAGGCGGAGATCAAAGCCTTGAGGCTCTCCGAACGACTCAAGGAAAAGGCCGTTGAAGAGCTTACTGAAGAATTGTCAAAGGTGGAGGGGAAGCTGAAATTAACTGAATCACTTCTAGAAAGCAAAAATCTTGAAATAAAGAAAATCAATGATGAAAAGAAAGCATCGATGGCTGCTCAGTTTGCAGCCGAAGCCACTCTTCGGAGGGTCCATGCTGCTCAGAAGGATGATGACATGCCTCCTATAGAGGCCATTCTTGCTCCTCTGGAGGCTGAACTTAAGCTTGCACGGCAAGAGATTGCTAAACTTCAGGATGATAACAAAGCTTTAGATCGTCTTACCAAATCTAAAGAAGCAGCACTTCTTGAAGCTGAGAAGACTGTACAAATTGCCTTGGCTAAGGCCTCCATGGTGGATGATCTCCAAAATAAAAATCAAGAACTAATTAAGCAGATTGAGATTTGTCAGGAAGAAAATAAAATTTTGGACAAAATGCATAGACTGAAGGTGGCAGAGGTTGAAAAACTTACCCAGACTGTGAGAGAACTAGAAGAGGCTGTCCTTGCAGGTGGTGCAGCTGCTAATGCTGTGAGAGATTATCAGCGGAAAGTTCAAGAAATGAATGAAGAAAGAAAAACACTTGACCGGGAGTTAGCTCGTGCAAAGGTAACAGCAAACAGAGTAGCTGTAGTGGTTGCAAATGAATGGAAAGATGCTAATGACAAAGTGATGCCAGTGAAACAATGGCTTGAAGAACGACGATTCTTGCAGGGAGAGATGCAGCAACTTCGGGACAAGCTTGCTATAACTGAGCGCACTGCAAAGTCTGAAGCACAGTTAAAAGAAAAATATCAATCAAGGCTTAAAGTGCTACAGGAGAGTTTGAGAGAAACTTCTAACAGTATTAATCGCGGCACCTCAGAGGGAAGATGTATTAGCAATGGGCCTTCTCGACGTCAATCCCTAGGTGGAGCTGATAACATCTCAAAGCTAACCTCTAATGGGTTTCTAAAGAGATCACCATCAACTCAACTTAGGTCTTCTGTGTCTTCAAGCACAGTTTTGAAGCATGCTAAAGGCACATCTAAATCCTTTGATGGTGGCACAAGGTCATTAGAAAGGAGCAAAATTCTTCTAAATGGAAAACCTCCAAGTTACTCATTCAACCAGTCTTCTGAAGGAACCAAGGACAGGGAGGAAAACGATAATTGGAAAGGAAATTCAGATGATAAGCCAAATGACTTCCCAACAGTGGATACAGAGGATAGTGTTCCAGGAGTTTTATATGATTTGCTGCAGAAAGAGGTCTTAGCCTTGAGGAAAGCTGGCCATGAGAAAGATCAAAGCCTAAAAGATAAAGATGATGCCATTGAAATGCTAGCAAAGAAAGTGGATACATTAACCAAAGCCATGGAAGTTGAGGCAAAGAAAATGAGAAGAGAAGTAGCTGCCATGGAGAAGGAGGTAGCTGCAATGCGTGTGGAGAAAGAACAAGATAGCAGAGCAAAGCGTTTCAGCAATGTAAAGGGCCCTATGAACAGTGCTCAACATCAGCTTGTTTCTGGAAGAAATGTGGCACGGGGAGGATTAACGCGCAGCACCCAATGA 1851 0.4538 MAEVSGDGGAEATLATPVPPLAVSGSFKEGKTSSRRRGHSMRPSLDADEFMNLLHGSDPVKVELNRLENEVRDKDRELSEAQAEIKALRLSERLKEKAVEELTEELSKVEGKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNKALDRLTKSKEAALLEAEKTVQIALAKASMVDDLQNKNQELIKQIEICQEENKILDKMHRLKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLAITERTAKSEAQLKEKYQSRLKVLQESLRETSNSINRGTSEGRCISNGPSRRQSLGGADNISKLTSNGFLKRSPSTQLRSSVSSSTVLKHAKGTSKSFDGGTRSLERSKILLNGKPPSYSFNQSSEGTKDREENDNWKGNSDDKPNDFPTVDTEDSVPGVLYDLLQKEVLALRKAGHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRVEKEQDSRAKRFSNVKGPMNSAQHQLVSGRNVARGGLTRSTQ 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02748 616 MobiDBLite consensus disorder prediction 380 449 - -
Cca09g02748 616 Pfam Microtubule-associated protein 70 48 597 IPR009768 GO:0007010|GO:0008017
Cca09g02748 616 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 1 616 IPR009768 GO:0007010|GO:0008017
Cca09g02748 616 MobiDBLite consensus disorder prediction 380 503 - -
Cca09g02748 616 Coils Coil 219 267 - -
Cca09g02748 616 Coils Coil 64 133 - -
Cca09g02748 616 MobiDBLite consensus disorder prediction 574 616 - -
Cca09g02748 616 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-1 1 616 - -
Cca09g02748 616 Coils Coil 278 305 - -
Cca09g02748 616 Coils Coil 362 382 - -
Cca09g02748 616 MobiDBLite consensus disorder prediction 588 616 - -
Cca09g02748 616 MobiDBLite consensus disorder prediction 474 498 - -
Cca09g02748 616 Coils Coil 167 194 - -
Cca09g02748 616 Coils Coil 549 576 - -
Cca09g02748 616 MobiDBLite consensus disorder prediction 1 46 - -
Cca09g02748 616 Coils Coil 327 354 - -
Cca09g02748 616 MobiDBLite consensus disorder prediction 30 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02748 Cca-Chr9 53176457 53180547 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02748 09 53176457 53180547 Cca09g02748 09 53176457 53180547 ECH