Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02744 ATGGCCGACGCTTCCTCGTTGATTCCGGCAGCCGTGCTTCGCAACCTTGCTGACAAGCTCTATGAGAAGCGCAAAAATGCTGCTCTTGATATTGAGGGGATAGTGAAGCAGCTGGCTACTGCTGGGGATCATGATAAAATAACGGCTGTGATCAATTTGTTGACTACGGAATTTACTTACTCACCACAAGCCAATCACCGGAAGGGAGGATTGATAGGATTAGCGGCTGCAACTGTGGGGTTGACTTCTGAAGCGGCTCAGCATCTTGAGCAAATTGTGCCCCCCGTGTTAAATTCTTTCTCTGACCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCATTATATAACATAGCCAAGGTTGTAAGAGGGGATTTTATTATTTTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGATTCAGATGCTAATGTACAAAGTGCTGCTCACCTTTTAGATAGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATCGAAGAATTTATACCACTGTTGAGGGAGCGCATGAATGTGTTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGATATGTTGGGTTTTCTTCCTGATTTTCTTGATGGCTTGTTTAATATGTTGAGTGATTCGAGTCATGAAATACGCCAACAAGCTGATTCAGCTCTTTCGGAGTTTCTTCAAGAGATTAAAAACTCCCCATCTGTAGATTATGGTAGAATGGCTGAAATCCTGGTACAGAGGGCGGGTTCTCCGGATGAATTTACTAGGCTAACAGCTATCACATGGATAAATGAGTTTGTCAAGCTTGGTGGAGACCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTTTGCCTTGTATATCAGATAAAGAAGAGAAAATTAGAGTTGTTGCTCGTGAAACCAATGAAGAGCTACGTGCTCTCAAGGCAGATCCAGCTGAAGCATTTGATGTAGGAGCAATCCTTTCCATTGCCAGGAGGTGTAGTTTTTTACATGGGCAATTATCTAGTGAATGGGAGGCTACTCGAATAGAAGCTTTGCACTGGATGTCAACCCTTTTAAACAAATATCGTACCGAGGTTTTGCAATATCTGAATGACATATTTGACACCCTGCTCAAGGCACTTTCAGATCCATCTGATGAGGTTGTTCTTCTTGTTCTTGATGTGCATGCATGCATTGCAAAAGATCCTCAGCACTTTCGACAACTTGTCGTTTTCCTTGTGCACAATTTCCGGGTAGACAATTCTCTTTTGGAGAAACGTGGTGCTTTGATAATTCGTCGACTTTGTGTGCTTTTGAATGCTGAGAGAGTCTACCGTGAACTTTCTACAATACTAGAAGGGGAATCTGACTTGGATTTTGCTTCAATTATGGTGCAGGCTTTAAATTTGATCTTACTTACATCATCGGAACTATCCGAGATTCGAGATCTTTTGAAGCAATCACTGGTAAATCCCGCTGGGAAGGATTTGTATGTTTCTTTGTATGCCTCGTGGTGCCATTCTCCAATGGCAATTATAAGTCTCTGCTTATTAGCCCAGACTTACCAACATGCGAGTGCTGTGATTCAATCTCTGGTCGAGGAGGATATTAATGTCAAATTCTTAGTCCAGCTGGATAAATTGATTCGCTTGCTGGAAACTCCAATATTTGCTTATCTAAGATTGCAGCTTCTCGAACCTGGAAGATATACATGGTTGTTTAAAGCATTGTATGGTCTTTTGATGTTGCTTCCTCAGCAAAGTGCTGCCTTCAAGATTCTCAAAACTCGTTTAAAAGCCGTGCCATCTTATTCCTTCAATGGGGAGCAATTGAAGAAGACATCCTCAGGGAATCCCTATCAATTTCTCCATCACATGTCTGGTGGATCTCAAATCAGTGAGGATGGTGACATAGCTATGGATGGTGGGAACTCACACAATGGGATAAATTTTGTTGCTAGGCTACAACAGTTTCAACAAATGCAGCACCAGCATCGTGTACATTTTAAAACACAGCCACTGTCGCGTAAAAGTTCCTCCTCGTCATCAAAGGAGGTGCAGAGACAGGAAGAACCAAGGCGGCCTCAGTTGAGTGAGCTTAATGTTGTTGCTCCTTCAAGATCATCTAAAAGAGTCCAGGGTAGCTAG 2187 0.4239 MADASSLIPAAVLRNLADKLYEKRKNAALDIEGIVKQLATAGDHDKITAVINLLTTEFTYSPQANHRKGGLIGLAAATVGLTSEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRALKADPAEAFDVGAILSIARRCSFLHGQLSSEWEATRIEALHWMSTLLNKYRTEVLQYLNDIFDTLLKALSDPSDEVVLLVLDVHACIAKDPQHFRQLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCLLAQTYQHASAVIQSLVEEDINVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYTWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKKTSSGNPYQFLHHMSGGSQISEDGDIAMDGGNSHNGINFVARLQQFQQMQHQHRVHFKTQPLSRKSSSSSSKEVQRQEEPRRPQLSELNVVAPSRSSKRVQGS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02744 728 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Cca09g02744 728 MobiDBLite consensus disorder prediction 714 728 - -
Cca09g02744 728 PANTHER TAX1 BINDING PROTEIN-RELATED 5 700 IPR026825 GO:0006661|GO:0070772
Cca09g02744 728 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Cca09g02744 728 PANTHER PROTEIN VAC14 HOMOLOG 5 700 - -
Cca09g02744 728 Pfam Vacuolar protein 14 C-terminal Fig4p binding 435 614 IPR021841 -
Cca09g02744 728 MobiDBLite consensus disorder prediction 675 728 - -
Cca09g02744 728 MobiDBLite consensus disorder prediction 675 695 - -
Cca09g02744 728 SUPERFAMILY ARM repeat 8 548 IPR016024 -
Cca09g02744 728 Gene3D - 249 422 IPR011989 -
Cca09g02744 728 Gene3D - 1 248 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02744 Cca-Chr9 53136119 53145871 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02744 09 53136119 53145871 Cca09g02744 09 53136119 53145871 ECH