Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02734 ATGCCAAACGCAAACACGCTCCTCCGACTCCCCTTCCTCCTCGCACTCTTCTCCGCCATGACAGCGCCGTCGTCCTCCGCCGTCGACACCTTCGTCTTCGGCGGCTGCTCCACCCCGAAGTACATGCCGGGCTCCGCGTACGAAAACAGCGTGAACTCGCTCCTCACCTCGCTCGTCAACTCCGCCGCGTTCACCAACTACAACAACTTCACCGCCCAAGGCGCCGCCGTCTACGGCCTCTTCCAGTGCCGCGGCGACCTCAGCAACGACCAGTGCTCGCGCTGCGTGGCGCGTGCGGTCACGCAGCTCGGCACGATCTGCTTCGACTCCTGCGGCGGCGCGTTGCAGCTGGAGGGGTGTTTCGTCAAGTACGACAATGCGACGTTCCTCGGAGTGGAGGACAAGACGGTGGTGGTGAAAAAATGTGGACCGTCCGTTGGGTTGACTTCCGACGCGTTGACCCGGAGAGATGCTGTGCTGGCGTATCTGCAGACGTCCGATGCGGTTTATAAGACATACAGGACGGCCGTGTTTGGGGATTTTCAGGGTGTGGCGCAGTGCACGGGGGATTTGAGTCCCAGCGAGTGCCAGGATTGTCTCTCTGATGCCATCCAACGGTTGAAAACCGAGTGTGGGCCCTCCCCCTGGGCCGATATTTACTTGGCCAAGTGCTACGCGCGCTACTCCCAGGGTGGGACTCACTCGCACGGGAATAATGATGATAACAATCAAAATGATGATGAGATCGAGAAGACACTCGCTATACTAATTGGACTCATAGCCGGGGTTGCTCTAATCATCGTTTTCCTTTCTTTCTTGTCAAAGGTGTGCGAAAAGCATAAAGGTGGTAAATAA 855 0.5766 MPNANTLLRLPFLLALFSAMTAPSSSAVDTFVFGGCSTPKYMPGSAYENSVNSLLTSLVNSAAFTNYNNFTAQGAAVYGLFQCRGDLSNDQCSRCVARAVTQLGTICFDSCGGALQLEGCFVKYDNATFLGVEDKTVVVKKCGPSVGLTSDALTRRDAVLAYLQTSDAVYKTYRTAVFGDFQGVAQCTGDLSPSECQDCLSDAIQRLKTECGPSPWADIYLAKCYARYSQGGTHSHGNNDDNNQNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKHKGGK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02734 284 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 281 - -
Cca09g02734 284 ProSiteProfiles Gnk2-homologous domain profile. 134 233 IPR002902 -
Cca09g02734 284 Pfam Salt stress response/antifungal 36 126 IPR002902 -
Cca09g02734 284 Pfam Salt stress response/antifungal 172 230 IPR002902 -
Cca09g02734 284 ProSiteProfiles Gnk2-homologous domain profile. 29 129 IPR002902 -
Cca09g02734 284 PANTHER PLASMODESMATA-LOCATED PROTEIN 6 6 281 - -
Cca09g02734 284 Gene3D - 28 129 IPR038408 -
Cca09g02734 284 Gene3D - 149 231 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02734 Cca-Chr9 53039154 53042053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02734 13 228 Receptor kinase-like Gene Family AT4G05200 25.862 8.99e-14 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02734 09 53039154 53042053 Cca09g02734 09 53039154 53042053 ECH