Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02731 ATGTTGATGGTAATTTTGTTGGAATGTGTAGGTTTCACAAAGGGTTCGACTGAACAATGGCCTTTCTCGAACAAAGTCTCTGCCCTTCCTTATTTGATGCCTTTCAAGGTTTCTCAAGATGATAAGGCTAAGAAAATAGTGTCTGATCCCTTAACTTCTGCTGGGTTTATGCCTATCTTGAGTCAAGATGCATTCTCTTCTGGTGAACCCAAGAAACATCACGATAGGCAAGGTGGCCTTCATTTTTCGCTGACTCCATATCCTGTACAACATGATGTCAATTCTGTGAATCATCCTCATGATGTGAAGATGTTTTCAGTTTTCAATCAAGATATTTCAGTTTCCTCTGGGAATCCATTCCTGAAGAATCATTTTGCAACTGCTGGTCAGAATATGAATGGCACTAATGTGAAGCAGCCATTACTCAGGAGAATACCTACAGCACCTCATTCAGTTCTTCCGTCTGTTGGTGCTGTTACTGGAATGACTGAATTGTGTGTGAAACCATCTGTGCCTTCTGCCCAACTTACCATCTTCTATGGGGGTACTGTCAATGTCTTTGAAGATATCTCTGCCGAGAAGGCACAAGCTATCATGTTGTTGGCTGGCACTAGCATATCTACAGCTTCTAACATGGCAAAACCAAAAGTTCATGTGCCTATCTCGAAGTTGGCTGCTGGTGATGGTGTGCCTGTGAGTCAACCTGCAAATACACCACCTGGCTCTCGTCTTTCAAGTCCTTTATCTGTTTCTTCACATACTGGTGCACCGTCAGGGAGTGGCTCAACTAGCACTGATGAATTTCTGGCTGCAAAAACAACTGGAGTTCCTACCACTCCTGTTAGCAATGTGGAGCCTCCAAAGGTTGTCAGTGCAACCACTATGTTGACATCAGCTGTACCTCAGGCTCGGAAAGCATCCTTGGCTCGATTTTTAGAAAAACGCAAGGAAAGGGTGATGAATGCAGCACCATATAACCTCAACAACAAGTCTGAAGAGTGTGCCACTGCAGAATATGCTGGTGCCAACTTTTCTGCAGGTACTGTCTCAGCCAAGCAAGGATAG 1065 0.4413 MLMVILLECVGFTKGSTEQWPFSNKVSALPYLMPFKVSQDDKAKKIVSDPLTSAGFMPILSQDAFSSGEPKKHHDRQGGLHFSLTPYPVQHDVNSVNHPHDVKMFSVFNQDISVSSGNPFLKNHFATAGQNMNGTNVKQPLLRRIPTAPHSVLPSVGAVTGMTELCVKPSVPSAQLTIFYGGTVNVFEDISAEKAQAIMLLAGTSISTASNMAKPKVHVPISKLAAGDGVPVSQPANTPPGSRLSSPLSVSSHTGAPSGSGSTSTDEFLAAKTTGVPTTPVSNVEPPKVVSATTMLTSAVPQARKASLARFLEKRKERVMNAAPYNLNNKSEECATAEYAGANFSAGTVSAKQG 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02731 354 Pfam tify domain 172 203 IPR010399 -
Cca09g02731 354 ProSiteProfiles Tify domain profile. 169 204 IPR010399 -
Cca09g02731 354 MobiDBLite consensus disorder prediction 235 266 - -
Cca09g02731 354 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 348 IPR040390 -
Cca09g02731 354 MobiDBLite consensus disorder prediction 230 266 - -
Cca09g02731 354 Pfam Jas motif 301 325 IPR018467 -
Cca09g02731 354 PANTHER PROTEIN TIFY 7 13 348 - -
Cca09g02731 354 SMART tify_2 169 204 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02731 Cca-Chr9 53009701 53013307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02731 20 334 Tify Gene Family AT3G17860 35.843 4.93e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Cca09g02731 tify 2.7e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02731 09 53009701 53013307 Cca09g02731 09 53009701 53013307 ECH