Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01795 ATGGCTGTCGGAGGTCAAGATTTGATCTGTGTCAAACAAAAACATTCTTCAAAGATTCCTCCTGGCGATCTCAGAAGACATTTAGAGGATCTTGGTGATTTTTTATTCTCAGATGTGAGAAGCCCTTCTTTACTACAGAGGAAGGCAGCAGATGGCAAACAGAAGGTCCCAGAGGTCTTTAACCGTGTAATGCAGTCAAACACAATGCAGTTCACTAGCATTTCAGAAACATCGAGCAAGGATGGCCTTACTGTTATTTGCTCAAAAAGAGGAGGAGATATGTTCAAGCACAGTCACTCAAATTGGCTTCAGACAGTGCCTTCTAATCCTGAAGCAATCCTCTTCAAGTTTGTTCCTATTTCCTCACTTCTGACAGGAATTCCTGGAAGTGGATATCTTAGCCATGCAATCAATCTGTATCTACGATATAAACCTTCTCCTGAAGATTTACAATACTTTTTGGAGTTTCAAATTCCAAGGCAATGGGCACCCATGTTTTGTGAGCTTCCGCTCAGGCATCAGCGAAAAAAGAGTGCTTCCCCATCCCTTCAATTTAGTTTCATGGGTCCAAAGCTTCATGTAATCTCTACACAGGTTGTAAGTGAAGAAAAACCAGTGGTTGGCCTACGCTTGTACTTGGAGGGCAAGAAATGTGACAGACTTGCTTTACACATACAACATCTTTCAAGCCTACCAAATAAAATGATCCTCTCTTCAGGAACCTCAACATCGAGCATGCCATGTATGTGGCGAGGATCTGATGATAGTGGATCCAGCGATCAATTTTTGGAAAGAATCAGATGGAAGAGGTTCTCAAATGTGTGCACAGCAGTGGTTAAGCATGATCCTAACTGGTTGAATAGTTCTGGAGGTGTTTATATTGTTACTGGTGCACAACTCCTTAGCAGAGGGAGCTGGCCAAGGAATGTGCTTCATCTGCGTCTTCTTTTTACTCATATATCCAATTGCAGTATCCGAAAATCTGAGTGGACCGCTGCACCAGAGGCTTCAAAAAAGTCATCTTTTCTCACAAATTTGAGCACAACATTTTCATTCACACAGCAGAGCCCTACTGGTCCTCCAAAACAGGCTCCAACTGCACTTAACTCTGGAGTTTATCCAGATGGTCCACCTGTGCCGGTTCGTTCCAGTAAACTACTTAAATACGTGGAGACAGCCGAGGTTGTGCGAGGCCCTCATGATGCTCCTGGCCATTGGTTGGTAACAGCTGCCAAGCTTGTGACTGATGGTGGTAAAATTGGATTGCAGGTGAAGTTTGCATTGCTAGATTATTGGTGA 1299 0.4349 MAVGGQDLICVKQKHSSKIPPGDLRRHLEDLGDFLFSDVRSPSLLQRKAADGKQKVPEVFNRVMQSNTMQFTSISETSSKDGLTVICSKRGGDMFKHSHSNWLQTVPSNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSPEDLQYFLEFQIPRQWAPMFCELPLRHQRKKSASPSLQFSFMGPKLHVISTQVVSEEKPVVGLRLYLEGKKCDRLALHIQHLSSLPNKMILSSGTSTSSMPCMWRGSDDSGSSDQFLERIRWKRFSNVCTAVVKHDPNWLNSSGGVYIVTGAQLLSRGSWPRNVLHLRLLFTHISNCSIRKSEWTAAPEASKKSSFLTNLSTTFSFTQQSPTGPPKQAPTALNSGVYPDGPPVPVRSSKLLKYVETAEVVRGPHDAPGHWLVTAAKLVTDGGKIGLQVKFALLDYW 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01795 432 PANTHER OS02G0475300 PROTEIN 1 431 - -
Cca09g01795 432 MobiDBLite consensus disorder prediction 352 374 - -
Cca09g01795 432 Pfam MAC/Perforin domain 61 140 IPR020864 -
Cca09g01795 432 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 154 IPR020864 -
Cca09g01795 432 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 1 431 IPR044663 GO:0006952|GO:0012501|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01795 Cca-Chr9 42635933 42641420 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00069 01 714392 719810 Cca09g01795 09 42635933 42641420 PCT