Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01690 ATGGCTAATTTGCTCGTGAATGAAAATTATGTTTACATGACCATCTTAATCGTTACATCAATATTCTTCTTCTTGAGTGCATCAATTATAGCCCAAGAAGACACCACCAAATTCGAAGAGTGTGGCAAGGCATACAATTGTGGACAAATGTCCATCTATTACCCTTTCTGGGGTGAGGAGAGACCAAGTTTCTGTGCCAGCAATCACCAATTCAAGCTCAAGTGCGAGGCTAATCAAAACACTACCATTCAACTTGGCTCACAAACCTTCCAAGTGCTTCAATATGATCAGGTGCGTTATACCTTGACGATGGTTCGAACAGGTCTTGTCTATGATAATTGTTCTTCCGCGGCCTTAACCAACACTTCCTTGGACTCGAGTCTCTTTACTTACACGCCAAATGCTAGGAACATCACCATCTTCTATGGTTGCCCTAGCTCCGTGACTTCAAATAGCACACACTCTTTTATGTGCCGGGAAGGTGGTGACAAGGGTGCTTTTTATGGGGACCCAAAAACTAAAAAAATTCAGGATTGTGAAGGAGATAGTATTGAAGTGCAAGTAACAGGAGAAGAACATGAGCCTGATGGTGGAATTCAAGGGCTGAACAAAGCCTTGAGTAAAGGGTTTCAAGTGCATTATTCTTCAGAAGCTCAAGTTCAACTGTGCGTAAAATGCATTTTAAGTAATGGAACATGTGGGGCTAATGATGAGTCTCAGTTTTCATGCTTTTGCCAGGATGGATCTGAAGCTTTAAATTGTTCTCATCATCGTAGTGATAAGTGGAATTGGAAAAGGAAGCTCGGCATAGGCCTTGGAGCTGCTGTGGTGAGTGCAATTGCAGTTGGCATTGCCTTCTATATCTATTATAGTCGTCAAAAGAAGAAGAATCATCTTCGTGAAGTATCATCATCTGTACTATCTCACGGAATCTCTTGTGGTTCTTCATCTGAAGACCCTGAGATGGGATGTAAATACTTTGGACTCCACTTCTTCTCCTATAGTGAACTTGAAGAGGCCACAAACTTCTTTGATCCTGCAAGACAACTGGGAGATGGAGGATTTGGCACAGTCTATTTCGGCAAACTTCATGATGGACGTTTGGTTGCAGTGAAAAGAATGTACGAGAACAGTGACAAGGGAGTTGAGCAATTCGCGAACGAAGTTGAGATCTTAACTGGCCTACACCATCAAAACCTTGTGTCACTATACGGTTGCACATCTCGGCACAGCAGAGAACTCCTCCTCGTATACGAATACATTCCAAATGGAACCGTAGCTGACCACCTTCACGGTCAAAGAGCAAAGCCAGGCACACTCCCTTGGCACATCAGAATGAACATCGCCATAGAAACCGCGAGTGCATTGGTATATCTCCACGCTTCTGACATCATCCACAGGGACGTGAAAACCAACAACATTCTCCTCGACAACCACTTCAGTGTCAAAGTAGCAGATTTTGGCCTCTCACGTCTCTTACCAATGCATGTCACACACGTTTCCACTGCCCCACAAGGGACACCTGGCTATGTTGATCCAGAATATCACGAGTACTACCACCTCACTGATAAGAGTGATGTTTATAGCTTTGGGGTGGTGCTGATTGAGCTTATATCATCCATGCCTGCGGTTGATATCACAAGGAGTAGGAATGAGATAAACTTGTCCAACATGGCCATTAAGCGGATCCAAAGTGGGGCGTTGCATGAGCTGGTGGACCCCACTCTAGGGTTTGAGAGAGATTTCAAGGTGAGGAAAATGATCAATGGTGTGGCTGAGTTGGCGTTTCAGTGCTTGCAGAGTTCCAAAGATGTGAGACCCTCTATGGCAGAAGTGTTGGATAGATTAGAGGATATAAGGAGTGATGGAAAGTGTAACGGGGGGCCTGAGGTGATGGATTTATCAGAAGATAATGCTGCTTTGCTCAAGAATAATGAACCACCTCCATCATCACCTGATTCAAATTTGGTCACCTTGTCTACACCACCACATGGTACCTGTACATAG 2007 0.442 MANLLVNENYVYMTILIVTSIFFFLSASIIAQEDTTKFEECGKAYNCGQMSIYYPFWGEERPSFCASNHQFKLKCEANQNTTIQLGSQTFQVLQYDQVRYTLTMVRTGLVYDNCSSAALTNTSLDSSLFTYTPNARNITIFYGCPSSVTSNSTHSFMCREGGDKGAFYGDPKTKKIQDCEGDSIEVQVTGEEHEPDGGIQGLNKALSKGFQVHYSSEAQVQLCVKCILSNGTCGANDESQFSCFCQDGSEALNCSHHRSDKWNWKRKLGIGLGAAVVSAIAVGIAFYIYYSRQKKKNHLREVSSSVLSHGISCGSSSEDPEMGCKYFGLHFFSYSELEEATNFFDPARQLGDGGFGTVYFGKLHDGRLVAVKRMYENSDKGVEQFANEVEILTGLHHQNLVSLYGCTSRHSRELLLVYEYIPNGTVADHLHGQRAKPGTLPWHIRMNIAIETASALVYLHASDIIHRDVKTNNILLDNHFSVKVADFGLSRLLPMHVTHVSTAPQGTPGYVDPEYHEYYHLTDKSDVYSFGVVLIELISSMPAVDITRSRNEINLSNMAIKRIQSGALHELVDPTLGFERDFKVRKMINGVAELAFQCLQSSKDVRPSMAEVLDRLEDIRSDGKCNGGPEVMDLSEDNAALLKNNEPPPSSPDSNLVTLSTPPHGTCT 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01690 668 MobiDBLite consensus disorder prediction 644 668 - -
Cca09g01690 668 SMART serkin_6 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01690 668 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 16 656 - -
Cca09g01690 668 Pfam Protein kinase domain 347 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01690 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Cca09g01690 668 Gene3D Transferase(Phosphotransferase) domain 1 421 626 - -
Cca09g01690 668 Pfam Wall-associated receptor kinase galacturonan-binding 41 105 IPR025287 GO:0030247
Cca09g01690 668 CDD STKc_IRAK 350 619 - -
Cca09g01690 668 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 656 IPR044652 -
Cca09g01690 668 SUPERFAMILY Protein kinase-like (PK-like) 320 617 IPR011009 -
Cca09g01690 668 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Cca09g01690 668 Gene3D Phosphorylase Kinase; domain 1 315 420 - -
Cca09g01690 668 Pfam Wall-associated receptor kinase C-terminal 172 248 IPR032872 -
Cca09g01690 668 MobiDBLite consensus disorder prediction 641 668 - -
Cca09g01690 668 ProSiteProfiles Protein kinase domain profile. 344 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01690 Cca-Chr9 41093947 41098215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01690 31 664 Receptor kinase-like Gene Family AT1G25390 43.293 2.22e-151 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Cca09g01690 Pkinase 1.6e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01690 09 41093947 41098215 Cca09g01690 09 41093947 41098215 ECH