Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01686 ATGAATTCATACGGTACCACAGTTTTTGCACACTTGTTTGGCCTCCTTGCCCTCATACTCTTGCTTGTTTGGTTGCTGCATTACCGTGAGGGGATTGAATATGATTCTGAAAATCCATTCCGTGTTTTTAATGTTCACCCTTTTTTGATGTTCTTCGGCTTCATTTTCCTTGTTGGCCAAGCAATACTAGCATACCAAACGGTGCCTGGACGACATGAAACACTCAAGATCCTTCACATGACACTTCATTTGATTGCTATAATTCTTGGGATTGTTGGTATTTGCGCCGCTTTCAAGTTCCATGACATGGTCAACTTCGAAGACGTTTACAGCCTCCATTCATGGATTGGCATTGGCACCTTTTGCTTGTTTGGCTTGCAGTGGCTTTTTGGACTGGCGTTCATGCTTCAAGGAACAGGACAATCGAGGGCTGCGATGGCCCCATGGCACGTGGCTGGTGGTAGGGCACTATTTTTCATGGCAATTTGTGCTGCACTAACAGGGTTGATGGAGAGGTATACTATGTTGAAACTACTGCCACACCAAAGAGAGTCTCATCTGATCAACTTCACGGGTCTTGCAATTCTCTTGTTTGGAGTTTTTGTCGATATGGCAATTGGTTTTGGACGTTTTGCGTGA 639 0.446 MNSYGTTVFAHLFGLLALILLLVWLLHYREGIEYDSENPFRVFNVHPFLMFFGFIFLVGQAILAYQTVPGRHETLKILHMTLHLIAIILGIVGICAAFKFHDMVNFEDVYSLHSWIGIGTFCLFGLQWLFGLAFMLQGTGQSRAAMAPWHVAGGRALFFMAICAALTGLMERYTMLKLLPHQRESHLINFTGLAILLFGVFVDMAIGFGRFA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01686 212 SMART 561_7 45 169 IPR006593 -
Cca09g01686 212 CDD Cyt_b561_ACYB-1_like 36 177 - -
Cca09g01686 212 Pfam Eukaryotic cytochrome b561 45 173 IPR006593 -
Cca09g01686 212 PANTHER CYTOCHROME B561-RELATED 3 209 IPR043205 GO:0016491
Cca09g01686 212 ProSiteProfiles Cytochrome b561 domain profile. 9 207 IPR006593 -
Cca09g01686 212 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 3 209 - -
Cca09g01686 212 Gene3D - 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01686 Cca-Chr9 41008494 41010032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01686 6 211 Chloroplast and Mitochondria Gene Families AT1G14730 60.287 5.08e-87 254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01686 09 41008494 41010032 Cca09g01686 09 41008494 41010032 ECH