Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01684 ATGGCAATGCCATCGGGAAATGTGGTAATACAAGACAAAATGCAGTTTCCAAGTGCTGGCGGTGAGATCCAGCAGCACCACTACCGCCAGCAATGGTATGTTGATGAGAGGGATGGGCTTATTGGTTGGCTGCGAAGCGAATTCGCAGCCGCCAATGCCATCATAGACTCTCTTTGTCACCATTTACGTGTGATTGGTGAGCCTGGGGAGTATGATATGGTCATTGGGGCCATTCAGCAGAGGCGGTGTAATTGGAATCAGGTGCTGATTATGCAGCAATACTTTTCTGTGGCTGATGTGGCGTATGCGCTGCAGCAAGTGGCCTGGAGGAGGCAGCAGAGGCCTCTGGATCCGGTGAAAGTGAGTGCAAGGGAAGTTAGGAAATCCGGTTCAGGTTACCGGCATGGCCAGAGGTTTGAGCCTGCAAAGGAAGGCTATAATTCTAGTGTAGAGTCCTATAGTAATGAGTCAAATGTTGTGGTTACTGGGAGCATGGAGAAAGGGACTCCAATTGTTGAGAAGAGTGAAGAACATAAATCTGGTGGCAAGGTTGAGAACGTGGGGGATAAGGGTTTAGCTTCTGCTGAAGAGAAGAAAGATGCTATAATAAAGCATCAAACTGATGGCAACTTGAAGAGCACAGGAAGTTGTGAAGGATCTCTGTCCAATGTAGAATCTGAAGCTGTTGTTGCAAATGATGGATGTGTATCTGATTCTAAAGGGAATGGTTCACTTTCTGTGCAAGATCAACTTCAGAGTCATAGTCTTTCTACAGGAGCAAAGACTTTTGTTGGCAATGAAATGTTTGATGGGAAAACGGTGAATGTGGTTGATGGACTGAAGTTGTATGATGATTTATTTGATAGCACAGAAGTATCAAAACTTGTTTCATTAGTCAATGATCTAAGGGTTTCTGGAAAAAAAGGACAGTTACAAGGAAGTCAGGCATATATAGTTTCAAGAAGGCCCATGAAAGGGCATGGAAGGGAATTGATTCAGTTGGGTGTTCCAATTGCTGATGCCCCAGCAGATGGGGAAAATATGACAGCAGCTTCCAAAGATATGAATGTAGAACCTATTCCTTCCTTGTTTCAAGATATTATTGAGCGAATGGTTTCCTCGCAAGTAATGACTGTGAAGCCTGATTGCTGCATTGTGGATTTCTATAATGAGGGTGATCACTCACAGCCCCACAGTTGGCCGTCATGGTATGGAAGACCCGTTTATATGCTTTTTCTGACAGAATGTGAAATGACTTTTGGAAGAGTGATTGCCTCAGAGCATCCTGGAGATTATAGGGGCAGTGTCAAGCTTTCTCTAGTCCCTGGGTCACTTCTGGCTATGCAAGGGAAATCCACTGATTTTGCGAGGCATGCACTTCCTTCCATACGCAAACAACGCATACTTGTCACCTTCACAAAGTCCCAACCAAGAAAGTCACTACCAAGTGATGCTCAACGTCTTGCCTCACCAGCAGCATCTTCTAATTGGGGTCCACTACCAAGCCGATCTCCCAATCATGTTCGTCAACACGTGGTTTCCAAGCATTATGCTACCCATGCGACCACTGGAGTACTGCCGGCTCCACCCATTCGACCACAAATTCCTGCTCCGGTGGGCATGCAACCGATGTTTGTTGGCGCTCCAGTTGTGCCTCCCATGCCGTTTCCTGCACCTGTGCCGATTGCTCCCAGTTCTGCTGCGTGGACGGCAGCTCCTCCTCCAAGGCATCCCCCTCCTCGAATCCCTGCTCCCGGCACAGGAGTCTTCCTACCTCCACCGGGCTCAGGTAATTCCTCTCAACAAAGCATGGAAACTCCAACCATGGTGGAGAAGGAAGATGGGAAAAGTAATCACAGTGGCACAAGTGCTTCACCAAAAGGAAAAGTTCTAAAGCAAGAATGTAATGGGCATGGTCATGAAACTCAAGTTGAACCAGCTCTAGAGACTCGGCAGGATAGCGATGACAAAGCTGCGCCAAGCCATACTTAG 1992 0.4714 MAMPSGNVVIQDKMQFPSAGGEIQQHHYRQQWYVDERDGLIGWLRSEFAAANAIIDSLCHHLRVIGEPGEYDMVIGAIQQRRCNWNQVLIMQQYFSVADVAYALQQVAWRRQQRPLDPVKVSAREVRKSGSGYRHGQRFEPAKEGYNSSVESYSNESNVVVTGSMEKGTPIVEKSEEHKSGGKVENVGDKGLASAEEKKDAIIKHQTDGNLKSTGSCEGSLSNVESEAVVANDGCVSDSKGNGSLSVQDQLQSHSLSTGAKTFVGNEMFDGKTVNVVDGLKLYDDLFDSTEVSKLVSLVNDLRVSGKKGQLQGSQAYIVSRRPMKGHGRELIQLGVPIADAPADGENMTAASKDMNVEPIPSLFQDIIERMVSSQVMTVKPDCCIVDFYNEGDHSQPHSWPSWYGRPVYMLFLTECEMTFGRVIASEHPGDYRGSVKLSLVPGSLLAMQGKSTDFARHALPSIRKQRILVTFTKSQPRKSLPSDAQRLASPAASSNWGPLPSRSPNHVRQHVVSKHYATHATTGVLPAPPIRPQIPAPVGMQPMFVGAPVVPPMPFPAPVPIAPSSAAWTAAPPPRHPPPRIPAPGTGVFLPPPGSGNSSQQSMETPTMVEKEDGKSNHSGTSASPKGKVLKQECNGHGHETQVEPALETRQDSDDKAAPSHT 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01684 663 MobiDBLite consensus disorder prediction 593 608 - -
Cca09g01684 663 Gene3D - 264 481 IPR037151 -
Cca09g01684 663 MobiDBLite consensus disorder prediction 474 507 - -
Cca09g01684 663 MobiDBLite consensus disorder prediction 567 663 - -
Cca09g01684 663 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 1 645 IPR044842 GO:0003729|GO:0006402|GO:0032451
Cca09g01684 663 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 645 - -
Cca09g01684 663 MobiDBLite consensus disorder prediction 571 590 - -
Cca09g01684 663 MobiDBLite consensus disorder prediction 633 663 - -
Cca09g01684 663 MobiDBLite consensus disorder prediction 474 503 - -
Cca09g01684 663 SUPERFAMILY Clavaminate synthase-like 270 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01684 Cca-Chr9 40942058 40947880 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01684 09 40942058 40947880 Cca09g01684 09 40942058 40947880 ECH