Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01683 ATGTCAGAGGTTGAGTTTGAACCTCAACATCCACGCCTCTTCATCCCCAACTTCCTCTCCCTCAACGAATGCAGAGTTCGTTTCTTACTCTATTTCTTTCTTCGCTTAAACCTTTTTGTCTTTCTTTTTACTCTGGTTTTGGTGAAGGAATTGGAATTCATCCACAAGAGTTGCAGCACCGTCGGTTACAGACCCAATGTTTTCTCCACCACTCTCTCTCATCTCATTGCTACCAACTCTTCCCATTTCATCATTCCTTTTGTTCCCATCAGAGAAAGGTTGAAGGAGAAGCTAGAACAGTTTTTCAAATGTGAGTATGAGCTCTTCATTGAATTCACTGGTTTAATCAGTTGGAGCAGAGGAGCAAGCATTGGATGGCACAGTGATGATAACAGGCCCTACCTCAAACAACGCCACTTCTCAGCAGTGTGCTATTTGAATACTTATGGCAAGGATTTCAGTGGTGGACTCTTTCACTTCCAGGATGGTGAGCCTGCATCAATTATGCCAAAGGCTGGAGATGTTGTAATGTACACAGCTGATGACCATAATGTTCATTCTGTTGACGAGATAACTGAAGGAGAAAGACTGACACTTGCTTTATGGTTCAGTCGTGATGGCTCCCATGATGAGGATGTGAAGCTTATTTCTCTTCTATCACAACACATATTACATAAGAACATGGCTGATTCATACCTTCCGTTGCCAGCATCCAGTAATATGTACTGGTTTTCTCAGGACCAAGCTTCTGATTACCAGTTTGGTTTTAATATATGTTGGGCTAGACTGCATGTTCTTGGATATGACATATATATTTCTCAAGACAGTGGCATTGAGTTTGATGTCTCTGAATTACTGGTAAAGCCAGTGCACTTAGTGAGGGGAAATGAGTTGCTAGATCAGGAATTTGTCAATATTATGCATGCACTTCAGGTTGTCCATTTCTTTTGTTGGAAAGGATCAGCTTTACAGAACAAGGTGTCAAATGTAGACTCCAAGGTAGTAAAAGTGACAGATATGCAGAGAGAGAAAATAAGTGGTCTGAATTCCGTACTTTTGAATGATGATGATTTTGCATCGAGAGTTTTTGGTTGTATGCCTTCCGAAGAAAATGGATGCATTTGCTTTGACTGGTCAGGAATTATGGCTGCAACCGCTGCTTGGGAAGATTATGCATCGAACTTAAGCAAACAAATTCATTTACAATTGCCTAACTGGAGAATGCATGAAGCTATATATGATGTGCAATTAGATGAATAA 1260 0.4063 MSEVEFEPQHPRLFIPNFLSLNECRVRFLLYFFLRLNLFVFLFTLVLVKELEFIHKSCSTVGYRPNVFSTTLSHLIATNSSHFIIPFVPIRERLKEKLEQFFKCEYELFIEFTGLISWSRGASIGWHSDDNRPYLKQRHFSAVCYLNTYGKDFSGGLFHFQDGEPASIMPKAGDVVMYTADDHNVHSVDEITEGERLTLALWFSRDGSHDEDVKLISLLSQHILHKNMADSYLPLPASSNMYWFSQDQASDYQFGFNICWARLHVLGYDIYISQDSGIEFDVSELLVKPVHLVRGNELLDQEFVNIMHALQVVHFFCWKGSALQNKVSNVDSKVVKVTDMQREKISGLNSVLLNDDDFASRVFGCMPSEENGCICFDWSGIMAATAAWEDYASNLSKQIHLQLPNWRMHEAIYDVQLDE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01683 419 Gene3D q2cbj1_9rhob like domain 77 222 - -
Cca09g01683 419 SMART p4hc 38 204 IPR006620 GO:0005506|GO:0016705|GO:0031418
Cca09g01683 419 Pfam 2OG-Fe(II) oxygenase superfamily 119 203 IPR044862 -
Cca09g01683 419 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 97 205 IPR005123 -
Cca09g01683 419 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 45 414 - -
Cca09g01683 419 PANTHER LEPRECAN 1 45 414 IPR039575 GO:0032963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01683 09 40934161 40938277 Cca09g01683 09 40934161 40938277 ECH