Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01682 atgggcaggaacagaagcagTTGTGTCCTCCTTCTTATGGTTGCGATTCTCACACTCTGTTTTGTTTCTTCCAAAGCAAAGCTTAAGAAACTCCAACATGCACCCAAAGCAGATGGGTCTTTAAGGTTCTTGGTGATTGGAGATTGGGGTAGAAATGGAGCCGATAACCAATCTCTAGTCGCTTTTCAGATGGGTGTAATTGGAGAGAAAATGGAGATTGATTTTGTGATCTCAACGGGAGATAACTTCTACGACAATGGATTAACCGGAGTGTATGATCCAGCCTTTGAAGAATCATTCACCAACATCTACACAGCACCTAGCTCGCAGAAGAAATGGTACAATGTTTTGGGAAATCATGACTACAGGGGAAATGCCATGGCACAAATAAGCCCTGTCCTTGGATATAGGGACAATCGATGGGTTTGCTTCAGATCATATGTTGTTAATTCAGAAAATGTAGACTTGGTTTTCGTAGACACAACTCCTTTTGTCAAAAAATACTTCATTGACACAAAAGGCCATAGCTATGATTGGAGAGGCGTATTACCCAGGAAGCGTTACATTTCTAAACTTCTCCGGGACGTGGATTTAGCATTAAGACAATCAACAGCGACCTGGAAGGTAGTGATTGGGCATCATACAATCAAAAGCGTTGGACATCATGGAGACACCCAAGAACTTTTAATACATCTTCTCCCAGTTCTTCAGGCAAATAATGTTGATTTGTACATAAACGGACACGACCATTGCTTGGAACATATAAGTAGCCTTGACAGTTCAATTGAATTTTTGACAAGTGGTGGTGGATCGAGGGCATGGAGAGGTGATGAGAAAGGAAGAAAAGGAGAGGAGATGAAGTTTTACTACGATGGCCAAGGATTCATGTCCGTACACATTTCTCAAATTCAGCTTCAAATAGCTTTCTATGATGTCTTCGGCAATGTCATGCACCAATGGAACACCTCCAAGTTTGAAATGTGTGCTCAAGGACTTGGACCTAATCTCGAAGTCGAAGGCCCAATAGTGACGAAATTAACAGGGTCTGCGGCAAGAAATGGGAATAAGGTGGCGTGA 1077 0.4132 MGRNRSSCVLLLMVAILTLCFVSSKAKLKKLQHAPKADGSLRFLVIGDWGRNGADNQSLVAFQMGVIGEKMEIDFVISTGDNFYDNGLTGVYDPAFEESFTNIYTAPSSQKKWYNVLGNHDYRGNAMAQISPVLGYRDNRWVCFRSYVVNSENVDLVFVDTTPFVKKYFIDTKGHSYDWRGVLPRKRYISKLLRDVDLALRQSTATWKVVIGHHTIKSVGHHGDTQELLIHLLPVLQANNVDLYINGHDHCLEHISSLDSSIEFLTSGGGSRAWRGDEKGRKGEEMKFYYDGQGFMSVHISQIQLQIAFYDVFGNVMHQWNTSKFEMCAQGLGPNLEVEGPIVTKLTGSAARNGNKVA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01682 358 PIRSF Acid_Ptase_5 5 331 IPR024927 GO:0003993
Cca09g01682 358 Gene3D - 35 330 IPR029052 -
Cca09g01682 358 PANTHER TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 9 324 - -
Cca09g01682 358 CDD MPP_ACP5 41 314 IPR024927 GO:0003993
Cca09g01682 358 PANTHER PURPLE ACID PHOSPHATASE 3 9 324 - -
Cca09g01682 358 SUPERFAMILY Metallo-dependent phosphatases 40 322 IPR029052 -
Cca09g01682 358 Pfam Calcineurin-like phosphoesterase 41 251 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01682 Cca-Chr9 40911275 40915275 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01682 09 40911275 40915275 Cca09g01682 09 40911275 40915275 ECH