Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01679 ATGTGGCCTAAATTAGTGGCTAATAAGATATTCAAGAAGCGACTAGGTAGCACCGATTTTATAGCAGATTACCCAAGTTATGAAGAACCCTTGCTGGGTATTGTAGACATTCATCACAACTCAAAAGCCATTCTTCATGATCACAAGGACACACAAAAGTACAAGGTATTTGTTAGTACATGGAACGTGGGTGGGATTGCACCGGATGAAGATTTGAATATAGATGACTTGTTGGAGACATGCAACAACTCCTGTGACATCTATATACTTGGGTTTCAAGAGATAGTGCCTCTAAAAGCATCAAATGTATTGGGGTCCGAAAATAATGAGATTTCTATGAAATGGAATTCCATGATCAGGAAGGCTCTGAACAAGAAAACACATGAGAGGGGCAGAAAATTAGATCAACGTGATGCTAAAAAACATTTTTGTCCCAAAAAGGAAGAAAATCCAGCTAAGTACTGTGATGCCCTACATGATTTCCAATGTATCATTAGCAAGCAAATGGTTGGAATATTCATATCTGTGTGGACTAGGAGAGATCTTTGTCCATTCATTCGGCATCCAAGCGTGTCATGTGTAGGCTGTGGTATAATGGGCTGCTTAGGAAACAAGGGTTCTGTATCAGTGAGATTTCAATTACATGAAACAAGCTTCTGCTTTGTGTGCAGCCATCTAGCTTCAGGGGGCAGAGAAGGGGATGAGAAGAACAGGAACTCTAATGTTGCTGAAATATTTTCCCGTACAATCTTTCCTAGAGGCCCTTTGCTTGATTTGCCAAGAACCATTCTTGATCATGATCATGTAATATTGCTTGGAGATCTAAATTACAGAATTTCTCTACCAGAAGAAACAACACGCTTGCTTGTTGAAAAACAAGACTGGGATTCATTATTAGAAAATGATCAGCTAATAATGGAGCTAAACACCGGAAACATGTTAAGAGGATGGCACGAAGGGGAAATTAATTTTGCTCCTACCTACAAATATTGTCCAAATTCAGACATTTACTATGGATGTTGCTATCACGGGAAAAAGGCAGAAAAGAGAAGAGCACCAGCATGGTGTGATCGAATAGTATGGTACGGTGAGGGTCTAAAGCAACTTGAGTACAGTAGAATTGAATCAAAACTATCAGATCACAGGCCCGTTAAGGCAATGTTTACAGCAGAAGTCAGGGTGTTCCTATCAGAAAACTTGCAAAACTTGTTCCTATCAGAAAGATTCGAACAAATTAAAACTCCCTTTGAAGTTTCCACCACTGATGATTTTGTAAGTAGAAAACGATCGAGCTTCCGGTTGTGA 1305 0.3954 MWPKLVANKIFKKRLGSTDFIADYPSYEEPLLGIVDIHHNSKAILHDHKDTQKYKVFVSTWNVGGIAPDEDLNIDDLLETCNNSCDIYILGFQEIVPLKASNVLGSENNEISMKWNSMIRKALNKKTHERGRKLDQRDAKKHFCPKKEENPAKYCDALHDFQCIISKQMVGIFISVWTRRDLCPFIRHPSVSCVGCGIMGCLGNKGSVSVRFQLHETSFCFVCSHLASGGREGDEKNRNSNVAEIFSRTIFPRGPLLDLPRTILDHDHVILLGDLNYRISLPEETTRLLVEKQDWDSLLENDQLIMELNTGNMLRGWHEGEINFAPTYKYCPNSDIYYGCCYHGKKAEKRRAPAWCDRIVWYGEGLKQLEYSRIESKLSDHRPVKAMFTAEVRVFLSENLQNLFLSERFEQIKTPFEVSTTDDFVSRKRSSFRL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01679 434 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 411 IPR045849 GO:0004445|GO:0046855
Cca09g01679 434 SMART i5p_5 52 397 IPR000300 GO:0016791|GO:0046856
Cca09g01679 434 Pfam Endonuclease/Exonuclease/phosphatase family 60 381 IPR005135 GO:0003824
Cca09g01679 434 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 411 - -
Cca09g01679 434 SUPERFAMILY DNase I-like 51 394 IPR036691 -
Cca09g01679 434 Gene3D Endonuclease/exonuclease/phosphatase 36 417 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01679 Cca-Chr9 40832843 40836470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01679 52 392 Acyl Lipid Metabolism Gene Families AT1G65580 26.478 2.27e-32 128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01679 09 40832843 40836470 Cca09g01679 09 40832843 40836470 ECH