Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01673 ATGGCATTGGCATTGCCTTCAACTACAAACTGCCTCCAATTCGCATTGCTTATCCACTGTTTGGTTCTCGCCTCCTGTTTGGATCTGGGAATAGCGCATCAGCCTCACTCCCATTCCGCTTTCTGCGCATCCGATGCAcatcgtcactgcggagatcaccaccatcatgaccatcatcatgaccatcatcatgaccatcaccatgcccatGCGCATGACAAGATTGATGCTAGGTTGAAGCTTCCCGAAGAGTTAGCGGAGGAGGAGGATATGAAATTATATGGGTTTGGTATCCCGCATCACCACGATCATCGCATTCAGACTACGGAACTTTCGGGTTTAGGTCTTTGGTTGAATGCATTGGGCTGTTCATTTCTGGTGAGCATGGCTTCTCTTATTTGCCTGATACTCCTGCCTGTAATTTTTGTACAAGGGAAACCATCAAAGGCTGTTGTTGACTCATTGGCTTTATTTGGGGCAGGAGCTATGTTGGGGGATGCATTTCTTCACCAATTACCACATGCTTTTGGTGGAGAGCACTCCCATTCTCACGGTAACCATGAAGATCATCATGACCATGATGCCAGTTCTGGACATGGTCATTCACATTCTTTAGCTGATCTTTCTACAGGAATATCCATCCTTGCTGGAATTGTACTATTTCTTCTTGTGGAGAAGATTGTGAGGTATGTTGAAGAAAACTCTGGAGGAGCAAATTCTTGGACGCATGGACACCACCACCATAACCACCATAACAAGAAAAAAGTGAAAGATGATAATTGTTCTACTGTCAACTTGCAGTCACAGTCTTCTGATGCCAAAGAGGAGAGATTGCTAGATGAGAGAAAAGATGATCAGGTGTCACATGACTCTTTGAAGGGAGATAATCCATCTCAATCTGAAACCTCACTCAGAAAGAGAATTGGAAGCAATGTGACCAAAGGTGATAATCTCGACACTAGTATTGTAGATAGCTCCACAAATAATATCAAATCTTCAAATGTTAAGGAACCAGTTAGATCGCCAACAAGTCTTGTGTTTGGTTATCTCAATCTTTTCTCTGATGGAGTGCATAACTTCACTGATGGAATGGCATTAGGAAGTGCATTCTTGCTTTATGGATCTGTTGGTGGCTGGTCTAGAACTCTGTTTTTGCTGGCACATGAGCTGCCTCAAGAGATTGGTGATTTTGGCATTCTGATAAGATCTGGTTTCAGCATACCAAAGGCTTTATTCTTCAACTTTCTGTCAGCACTTGTGGCACTTGCAGGCACTGCATTGGCTCTTCTGTTGGGGAAAGACCCTGGACAGTCATCTCTGATTGAGGGATTTACAGCAGGTGGATTTATATACATTGCAATTGCAGGAGTACTTGCAGAAATGAATAACAGTGGGAATACAACATTAAGAAGTACATTTGTCCAAATAATATCACTGACAATGGGCATGGCTGTTGCCCTTGGTATTTCCCTTGTAGAATGA 1482 0.4089 MALALPSTTNCLQFALLIHCLVLASCLDLGIAHQPHSHSAFCASDAHRHCGDHHHHDHHHDHHHDHHHAHAHDKIDARLKLPEELAEEEDMKLYGFGIPHHHDHRIQTTELSGLGLWLNALGCSFLVSMASLICLILLPVIFVQGKPSKAVVDSLALFGAGAMLGDAFLHQLPHAFGGEHSHSHGNHEDHHDHDASSGHGHSHSLADLSTGISILAGIVLFLLVEKIVRYVEENSGGANSWTHGHHHHNHHNKKKVKDDNCSTVNLQSQSSDAKEERLLDERKDDQVSHDSLKGDNPSQSETSLRKRIGSNVTKGDNLDTSIVDSSTNNIKSSNVKEPVRSPTSLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHELPQEIGDFGILIRSGFSIPKALFFNFLSALVALAGTALALLLGKDPGQSSLIEGFTAGGFIYIAIAGVLAEMNNSGNTTLRSTFVQIISLTMGMAVALGISLVE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01673 493 Pfam ZIP Zinc transporter 115 489 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca09g01673 493 MobiDBLite consensus disorder prediction 239 320 - -
Cca09g01673 493 MobiDBLite consensus disorder prediction 53 73 - -
Cca09g01673 493 MobiDBLite consensus disorder prediction 180 200 - -
Cca09g01673 493 MobiDBLite consensus disorder prediction 53 69 - -
Cca09g01673 493 PANTHER ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4 23 493 - -
Cca09g01673 493 MobiDBLite consensus disorder prediction 292 320 - -
Cca09g01673 493 MobiDBLite consensus disorder prediction 178 202 - -
Cca09g01673 493 MobiDBLite consensus disorder prediction 273 291 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01673 77 442 Organic Solute Cotransporters AT1G68100 64.499 3.00e-134 393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01673 09 40746142 40761424 Cca09g01673 09 40746142 40761424 ECH